Coregonus clupeaformis (lake whitefish): 121542100
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Entry
121542100 CDS
T08357
Name
(RefSeq) RNA-binding protein 4-like
KO
K13189
RNA-binding protein 14
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121542100
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121542100
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
121542100
NCBI-ProteinID:
XP_041707492
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All DBs
Position
27:complement(39918018..39921729)
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AA seq
513 aa
AA seq
DB search
MESTDKNDAIKLFVGNLALDTSQEDLTQLFGPYGQVVTCSVLRQFAFIHLQGDGAADLAI
RELNGREFRGRNLVVEESRGRPMHSTKVFVGNLSAMCSAEDLQELFQTFGKVLECDKVKA
RLSSSAGYAFVHMERKEDAVQAIEALHGTTFKGRPLSVELSNVQPSNPTTTTAKAPIMSH
YATESLSIKPHMEHHQSQAAVLAAAVAAAAGLPLQVQQSLHNSVYNTTSFDPTYAALKGM
TAASATDGTPVSPAVYGALASQVYGSVADQVYDSIANQASSYHNSATPDAAGYSNQYDPT
AGEAPSAQAAVNPAYGGASALYNASSAYGSMGGAEPTAQAIFEAARARFFQQGQQVLAEQ
QMGTKSGDRDRSPVRRSTPLLPDPVPQPFPQPRPKRRALLPTPPGRPEDPAADRDPIARC
YAEYYQQVQQYQQYQQYQQQYQQYQYGYPPPAPTQMPPTMPTYQMPMQAPPPTEAHNLAA
PATYAPARAYEPPPSHKEPLLRRPDYSHMPEPR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaacggataagaacgatgctataaagctctttgtggggaacctggctttggac
acctctcaggaggacctgacacagctctttgggccatacggacaggtggtcacctgtagt
gtactcaggcagtttgccttcatccatctccagggagatggtgctgctgatctagccata
agggaactgaatggacgggagttccgtggccgcaacctggtggttgaagagtcccgcgga
aggcccatgcattccaccaaggtgtttgtggggaacctcagtgccatgtgttctgccgag
gacctgcaagagctctttcagacctttgggaaagttctggagtgtgataaggttaaagcg
aggctctcctcctctgcgggctatgcctttgtacacatggagcggaaggaggatgcagtg
caggctatcgaggctctccatgggaccaccttcaaaggccgaccgctctctgtggagctt
tccaatgtgcagcccagtaatcctaccacaactacagccaaggcccccatcatgagtcac
tatgccactgaaagcctctccatcaagccccatatggagcaccaccagagtcaggctgct
gtactggctgctgcggttgctgcagctgcaggtctgcctcttcaggtgcagcagagcttg
cacaactctgtctacaacacaacaagctttgatcccacgtatgctgcactaaagggcatg
acggcagccagcgccacagatggtaccccagtgagccctgctgtctatggtgccctcgcc
agccaggtgtacggctctgtagcagatcaggtatacgactctatagcgaaccaggcctcc
agctatcataattcagccacaccggacgcagcaggctacagtaaccagtacgaccccaca
gctggagaggcaccgtcagcccaggctgctgtcaacccggcctacggtggggcatcggcc
ctctacaacgccagctcagcctatggctccatggggggcgcagaacccactgcccaggcc
atctttgaggcagcacgggcccgcttcttccagcagggccagcaggttctagctgagcag
cagatggggactaagtcaggggacagggaccgcagcccagtacgccgctccaccccactg
ctgcctgaccccgtgccccagcccttcccccagccacgccccaaacgccgcgccctcctc
ccaacgccacccggccgaccagaggaccccgctgctgatagagaccccattgccagatgc
tatgcagagtactatcagcaggtccagcagtaccaacagtaccagcagtaccaacaacag
taccagcagtaccagtatggctacccacctccagccccgacccagatgccccccacgatg
cccacctaccagatgcccatgcaggccccacccccgaccgaggcccacaacctggcagcg
cctgctacctacgccccagctagagcgtatgaaccgcctccatcacacaaggagcccctc
ctccgccgccctgactactcccacatgccagagccccgataa
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