Coregonus clupeaformis (lake whitefish): 121542136
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Entry
121542136 CDS
T08357
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121542136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121542136
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121542136
Endosome - Golgi transport
Arf GTPase associated proteins
121542136
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121542136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
RhoGAP
PH
PH_6
DUF7573
Sharpin_PH
Zf_1st_IFT121
Motif
Other DBs
NCBI-GeneID:
121542136
NCBI-ProteinID:
XP_045064144
LinkDB
All DBs
Position
27:41102777..41121724
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AA seq
1186 aa
AA seq
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MSAPLGPDMPMPVPKPRACYKRSGVSLQSQLSSERDLIHDTPDTGIHSKGIPPANDLQAE
NEDNPAIILNKPPVSPAITSPADQNPSQRNFPLFRSDSGVTPSYPVLDSNEPDGLLDRSA
WLSLSPHSPAADTDPYVSPAADTDPYVSPAADTDPYVSPTADIDPYVSPAADTGPYVSPA
ADTDPYVSPAADIDPYVSPAADIDPYVSPAADTDPYVSPAADTGPYVSPAADTDPYVSPA
ADYDPYVSPAADTDPYVSPAADTDPYVSPAADTDPYVSPAADTDPYVSPAADYDPYVTVV
ADWEKDPGSGSESSIDDDAVTGEIKNPSHMNNVASGQVCIAVVPSRETYQPPVDKESMQT
RPLKQKIPRAATIRVSRRKQAAVSGGATQVAESSRRENVVSRSSWLDVWKGRRHNVLWAT
LDGPLVSLWKKRTDKFTDLVFHVSSITNVCKQDKGRFSLYFRKKHFEFMAHNEAVQEGWV
TSLLASRGWDPAAPPEQHGALTMKDPRSSRVYAAICGHNLWIYNNKEDFQLGVGMTYVSM
NVASVKQTGRHNFCLITPYKTFNFSTDSSRELAVWLGSLNQVILSALSCSEVAHRLWANP
WNKVCADCGSANPEWASVNLLVVICEACAGQHRSLGIHVSKVRSLKLDSKVWTEPLILLF
VHYGNKAANDVWGHNVPGAEQILPDSSVEKRGDFIKAKYTKGRYRCTHPLASSQRLLNQR
LCEVVCGPNVPETMSLLCSGARVLCLSGDPQCPSPISLAERAGQAMQTELLRHNEYTEAP
AYAHQVPSRDPATSDPPSAAVEEELHGKLEEDRFLFSQENDSAACDVLDLREVISIFHRS
NGSTHEFEMVTLTDQLVCSADTKEDLLNHLLHILRVVLPGPIDEEELDGVFAVSRVSLRE
GGGLQHTEVWAVLRGGQVLVYPTDQQRHRERLTLNLETQYKIDSSENTIELVTGERTMSM
QFERDHSCQSWHTLLKQAVTTKRKQRPSLYELPPNSSGNVPPAIERCISHITQYGLKVEG
LYRRCGLATKVSSLVEALSRSPKTAPLEKDEQGLLDAACALKQYVRQQVVLIPQTQRELW
VEAAAHTEETLRLAAYRRLLKKLPPDNRITLNALCGHFYIVQLYSVENRMTAQNLALVFV
PTLFQELAMNTDMVRLTRELIIHHTFIFLGKEQESDMESEELITKL
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccccctcggtccagacatgcctatgccagtacctaaaccacgggcttgctac
aagcggtctggcgtgagcttacagagccagctgtcttctgagcgggatttgatacatgat
acacctgatacgggaattcatagcaaaggtattccacccgcaaatgatttgcaggcagaa
aatgaagacaaccctgccattatcctaaataagcctccagtcagtcctgccattaccagt
ccagctgaccagaatccaagccagcgtaatttccctctcttcagatctgattctggagtg
actccatcttacccagtactggacagtaatgagccagatggactccttgacagatctgcc
tggttgtccctctctccacacagtccggctgcagatactgacccctacgtcagtccggct
gcagatactgacccctacgtcagtccggctgcagatactgacccctacgtcagtccgact
gcagatattgacccctacgtcagtccggctgcagatactggcccctacgtcagtccggct
gcagatactgacccctacgtcagtccggctgcagatattgacccctacgtcagtccggct
gcagatattgacccctacgtcagtccggctgcagatactgacccctacgtcagtccggct
gcagatactggcccctacgtcagtccggctgcagatactgacccctacgtcagtccggct
gcagattatgacccctacgtcagtccggctgcagatactgacccctacgtcagtccggct
gcagatactgacccctacgtcagtccggctgcagatactgacccctacgtcagtccggct
gcggatactgacccctacgtcagtccggctgcagattatgacccctatgtcactgtcgta
gctgactgggaaaaagaccctggatccggatctgaatcgtccattgatgacgatgccgtt
actggagaaataaagaacccatcccacatgaacaatgtggcgtcagggcaggtttgtatt
gctgttgtccccagtcgagaaacctatcaacctcctgtggacaaggagtctatgcagacc
agacctctcaaacagaagatcccacgtgcggccaccatccgtgtcagcaggagaaaacag
gcagcagtgagtggtggtgctacccaggtagcagagtcctctcgtagggagaatgtggtg
tcccgatccagctggctggatgtatggaaaggccgcaggcacaatgttctgtgggccacc
ctggatggaccgttggtatcactttggaagaaacgcacagacaagttcacagacttagtg
ttccatgtgtcaagcatcaccaacgtctgcaagcaggacaaaggacgcttctccctttac
ttccgcaagaagcactttgagttcatggcgcacaacgaagcggtgcaggagggctgggtg
acgtccctcctggcctctcgtggatgggaccccgcagcccctccggagcagcatggagcc
ctgaccatgaaggaccctcgcagcagcagagtgtacgctgccatctgtggacacaacctg
tggatctacaacaataaagaggacttccaattgggggttgggatgacctatgtgtccatg
aacgtggcttcagtgaagcagactggccgtcataacttctgcctcatcacaccgtacaaa
accttcaatttctccacagactcgtcgagggagctggccgtgtggctggggagcctgaat
caggtgatcctcagtgccctgtcatgcagcgaggtggcccaccgactctgggccaaccca
tggaacaaagtgtgtgccgactgtggcagtgccaaccctgagtgggcctcagtcaacctg
ctggtggtcatctgtgaggcctgtgcaggtcagcatcgctctttgggcatccatgtctcc
aaagtgagaagcctgaagttggacagtaaagtgtggaccgaacctctgattctgctgttt
gtccattatgggaacaaagcagccaatgatgtgtggggtcacaacgtgccgggtgcagag
cagattctgccagactcctctgtggaaaagagaggggacttcatcaaggccaagtacacc
aagggccgatacagatgcacccatccgctagcctccagccagagactgctcaaccagagg
ctgtgtgaggtggtgtgtggccctaatgtcccagagaccatgtcattgctatgctcgggg
gcccgggtcttgtgcctctcaggggaccctcagtgcccctcgcccatctccctggcagag
cgggctggacaggccatgcagacggaactgctcagacacaacgagtacacagaggcccct
gcctatgctcatcaggtgcccagcagagaccctgcgacctctgaccccccttctgctgca
gtagaggaggagctccatgggaagttggaggaggaccgcttcctgttctcccaggagaat
gactctgcagcctgtgatgttctggacctgagggaggtcatctccatcttccaccgctcc
aacggatcgactcatgagtttgaaatggtgactctgacggaccagttggtgtgcagtgct
gacacaaaagaggatctactcaatcacctgcttcatattctcagggtggtgttgcccggg
cccatagatgaggaggagctggacggagtgtttgctgtgtcccgggtgtctctgagggag
ggaggaggcctgcagcacactgaggtctgggcagtgctccgtggaggtcaggtcctcgtc
tatcctactgaccagcagcgtcacagagagaggctaacactcaaccttgagactcaatac
aagatagattcctctgagaacaccatagagctggtcactggagagagaaccatgtccatg
cagtttgaacgagaccacagctgtcagtcctggcacaccctactgaaacaggcagtaacc
acaaagaggaagcagcgcccatcactgtacgagctgccccccaacagcagtggcaatgtg
ccccctgccattgagaggtgtatctcacacatcacacaatatggcctgaaggtggagggg
ctgtaccggcgctgtggcttggccactaaggtcagcagtctggtggaagccctcagcaga
tcacctaaaactgcccctctggagaaagatgaacagggtctccttgacgctgcatgtgcc
ctgaagcagtatgtccgccagcaggtggtgctgatccctcagacacaaagggaactgtgg
gttgaggctgcagcccacacggaagagacccttagactggctgcctaccgcagactactg
aagaagctgcctcctgacaacagaatcacactcaacgccctctgtggacacttctacata
gttcagctgtacagtgtagagaaccgtatgacagctcagaacctggcgctggtgtttgtc
cccacactgttccaggagctggccatgaacacagacatggtgcgcctcaccagagaactc
atcatacaccacacattcatcttcctgggtaaagaacaagagtctgacatggagagtgaa
gaactcataacaaaattgtag
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