Coregonus clupeaformis (lake whitefish): 121542316
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Entry
121542316 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: sodium-dependent dopamine transporter-like
KO
K05036
solute carrier family 6 (neurotransmitter transporter, dopamine) member 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121542316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121542316
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121542316
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF
DUF997
Motif
Other DBs
NCBI-GeneID:
121542316
NCBI-ProteinID:
XP_045070453
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All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MKVELILVKEQNGVQFTTSTLVSPAGHPHGHGHALGPSHGHTPVPGEERETWGKKIDFLL
SVIGFAVDLANVWRFPYLCYKNGGGAVLVPYMFFMVIAGMPLFYMELALGQHNREGXAGV
WKICPIFKGVGFTVILISLYVGFYYNVIIAWALFYLFSSFTGDLPWVHCNNTWNSPNCSD
LWAFNNSLNDTHKSTPAAEYFERGVLHLQDSEGIADLGLPRWQLTSCLAVVIVVLYFSLW
KGVKTSGKVVWITATMPYVVLTVLLLRGVTLPGAMDGIKAYLSVDFRRLCEPQVWIDAAT
QICFSLGVGFGVLIAFSSYNKFSNNCYRDAIITSSINSLTSFFSGFVIFSFLGYMSHKHS
VPLDKVATDGPGLVFIIYPEAIATLPGSSVWAVIFFIMLLTLGIDSAMGGMESVITGLMD
EFKFLHKHRELFTLFIVVSTFLISLFCVTNGGIYVFTLLDHFAAGTSILFGVLIEAIGIA
WFYGVDRFSDDIEEMIGQRPSLYWRLCWKFVSPCFLLFMVVVSFVTFNPPNYGTYTFPVW
ANMIGWCLAISSMTMVPLYAIYKMCTLPGKFCDRLAYAITPEHEHHLVDNGEVRRFTLQH
WMVI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtggagctgattctggtgaaggagcaaaacggggtccagttcaccacctccacc
ttggtcagccctgctggccacccccacggccatggccatgctctgggacccagccacgga
cacacccctgtccctggagaagagagggagacctgggggaagaagatcgactttctcctg
tcggtgatagggttcgctgtggacctggccaacgtgtggaggttcccctatctctgctat
aagaatggaggaggagccgttctggtgccctacatgttcttcatggtgatagcaggcatg
cctctgttttacatggaactggctctggggcagcacaacagagagggangcgctggcgtc
tggaagatctgccccatattcaaaggtgttggtttcacagtgatcctgatcagtctgtat
gtgggcttctactacaacgtgattatagcttgggccctgttctacctgttctcttccttc
accggggacctgccctgggtccactgcaacaacacctggaacagccccaactgctccgac
ctctgggccttcaacaactccctcaacgacacacacaagtccacccccgcagccgagtac
tttgagcgtggggtcctccacctgcaggacagtgagggtatagcggacctgggtctgcct
cgttggcagctgacgtcctgtctagctgtggtcatcgtggttctctacttcagcctctgg
aagggggtcaagacctcagggaaggttgtgtggatcacagccaccatgccttacgtggtt
ctgactgtcctgctgctgcgtggtgtcaccctccctggagccatggatggcattaaggcc
tacctcagcgtcgacttccgacgactctgtgagcctcaggtctggatagacgctgccact
cagatctgcttctctttgggagtggggtttggtgtgctaatagccttctccagctataac
aaattcagcaacaactgctatagagatgccatcatcaccagctccataaactctctgacc
agcttcttctctggcttcgtcatcttctccttcctggggtacatgtcccataaacacagt
gtaccactcgacaaggtggccacagacggtcctggtctggtgttcatcatctacccagag
gccattgctacattaccaggctcctcagtatgggccgttatattcttcatcatgttgctg
accctgggcatcgacagtgctatgggagggatggagtcagtgatcacaggattgatggat
gagttcaagtttctccacaaacaccgggaactcttcaccctcttcatcgttgtgtccacc
tttctcatctcactgttctgtgtcactaacggtggtatctatgtgttcactctgctggac
cattttgctgctgggacatcgattctctttggagtgcttattgaggccatcggaatcgcc
tggttctacggagtggatcggttcagcgatgacattgaggagatgattggacagaggccg
agcctgtactggagactgtgttggaagtttgtcagcccatgcttcctcctgttcatggtg
gtggtgagcttcgtgacctttaaccctcctaactacgggacatacacgtttcccgtatgg
gccaacatgattggctggtgcctggctatatcctccatgaccatggtgcctctctatgcc
atctacaagatgtgcaccttacctggaaagttctgtgatagactggcttacgccataaca
cctgagcacgaacaccacttggtggataatggagaagttaggaggtttacgctccaacac
tggatggtgatctga
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