Coregonus clupeaformis (lake whitefish): 121542330
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Entry
121542330 CDS
T08357
Name
(RefSeq) meckelin-like isoform X1
KO
K19348
meckelin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121542330
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
MKS complex
121542330
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GFIT
Motif
Pfam:
Meckelin
Motif
Other DBs
NCBI-GeneID:
121542330
NCBI-ProteinID:
XP_045064304
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All DBs
Position
28:complement(7480162..7493867)
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AA seq
1000 aa
AA seq
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MATGTLLVYICRLALFLTIKSNLLHSQQFTISFQRPADCGVEQFYDISSLSCVKCGPNQR
TSATGLSCECVTGFRVLATNGASITCQQCPLEKRAVTEDGYGCILCPGSLTEQGTCQCPS
GSILVERDVKGNPLEEARCEVCNGAEPALSAPDSYGDRCQRCQASFINTSQSCMCGSNIL
AGGLCFLPNNLQTAVNPNVNYAELSIPVQSAWFSTNLYSSAAACLVYTNLTACQALGNMC
VMNMHSFGSVANDACGLYNTIFRATASLGSTQDISYWRANLPWLYYGDQPGLANRVLQTE
PLPTGFSFKGRNRNTDINLVAAVYNARGDFLQWEKVGGNNLQLCPDTARRQEAAYTFGTA
YQETCVLSIADLLSVYAEPLFYDVFVDLSRGEDRRLLPLPTRNLNQEYNRKFINRGNLND
WYLSRRVLLVDTLSGREKSLSSLPKVIRIASSIRIGFQLVPGTQKGQVFPPLLSVTYSDV
LITDPNTQTVSVSFAVEYEMDQTEAHMKTDIALGVLGGVSVLYSLVKTASWKRRIGSPLI
DMETVLKFLLFYAGDLANVFFIITVGTGLYWLIFYKTVEAQHFVSVLLPLPGPQEERFMA
YVGCAFALKTVQFLHKLIQQLSVDIFFIDWERPRGKANKTIQGDGNGEAKRDPSPVSIWR
TYFVANEWNEIQTIRKISPTFQIMAVLFLLEVVGFSSLALRDPWSDLQRPPQSYFPPYSL
TLRYGLAATLWLCMGLLQIIFFAAFHERFVEDKIRQFVDLCSISNISVLLLSHRCFGYYI
HGRSVHSHADTNMEEMNINLKREAVRTHRETDRASEWESLCGQRGLLPNTDTQTFQISIT
SRLRQQYDRILEPLSRRTGPSRLVDAASGHPFDQSTKAYHTMNRFLGSVIDHAHRDMEYV
VRDKLFFESVIGMEFMEPMDKSIFYNDESHSFSDVLFYGNEATLLIFDTLFFCVVDLGAQ
SFILAAVLTYAQQMIFRLIRNGIGRRNLANKTLVDQRFLI
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggggacgctacttgtgtacatctgcagattggcactatttctaacaataaaa
tcaaacctacttcactcccagcaatttacgatttcgtttcagcgtcctgcagactgcggc
gtggaacagttctatgacatctccagtctgtcctgtgtgaaatgcggaccgaaccagagg
acgagtgcaacgggtctgtcttgtgaatgtgtgactgggttcagagttcttgccaccaac
ggagcttccatcacctgtcagcagtgtccactagaaaaacgggcagtaacagaggatggc
tatgggtgtatcctctgtccgggcagtctgactgagcagggaacctgtcagtgcccgtct
gggagtatactggtggagcgggatgtcaaggggaaccctctggaagaggccaggtgtgag
gtgtgtaatggagctgaacctgccctctcagcccccgatagctacggagacaggtgtcag
agatgccaggcttccttcatcaacacctctcagtcctgtatgtgtggctccaacatcctg
gctggaggtttgtgtttccttcccaacaacctccaaacagccgtgaacccaaacgtcaac
tatgctgagctgtccattcctgtgcagtcggcatggttctccacgaacctctactcttca
gcagctgcctgcttggtgtatactaacctgacagcatgccaggcactggggaacatgtgt
gtgatgaacatgcactccttcggcagcgtggccaatgatgcctgtggtctctacaacacc
atcttcagagctaccgcttccctggggtctacacaggacatatcctactggagagccaat
ctcccatggctttactacggggaccagccgggtctagccaaccgcgtgctgcagacagag
ccacttcccactggattcagcttcaagggacgcaacaggaatacagacatcaacctagtg
gctgctgtctacaacgccagaggagacttcctccaatgggagaaagtgggaggaaacaac
ctgcagctctgtccagacactgccaggagacaggaggcagcttacacctttggcactgcc
taccaggagacttgtgttctctccatagcagacctgttgagtgtgtatgctgagccttta
ttctatgatgtgtttgtggatctgagccgaggagaggacaggagactgctccccctcccc
acacgcaacctcaaccaagaatacaacaggaagttcatcaaccggggtaacttgaacgac
tggtacctatcgaggcgtgtgttactggtggacactctgagtgggagagagaagagcctc
agctctctgccaaaagtcatacgcatcgcaagcagcatcaggattgggttccagctggtg
ccagggactcagaaggggcaggtgttccctcctctcctctctgtgacctactcagatgtc
ctcatcactgacccaaacacacagactgtctctgtgtcgtttgctgtggagtatgagatg
gaccagactgaggctcacatgaagactgatatcgccctaggtgtgttgggtggcgtttct
gttctgtattccctggtgaagacagccagctggaagaggaggattggatctcctctcatt
gacatggagactgtattgaagttcctgttgttttatgctggtgatctggctaatgtcttc
ttcatcatcaccgtgggaacaggcctgtactggctcatcttctataagacggtggaggcc
cagcattttgtgtcagtgctgctaccgttgccaggtccgcaggaggagaggtttatggcg
tatgtgggctgtgccttcgctctcaagactgtgcagtttctccataagctaatccagcag
ttgtcagtggatatcttcttcatagactgggagagaccgcgcggcaaagccaacaagacc
atccagggcgatggcaacggtgaggcgaagcgcgacccatctcctgtcagcatctggagg
acctactttgtggccaatgagtggaatgagattcagaccatacgcaagatcagccccacc
ttccagatcatggctgtgctcttcctactagaggtggttggcttctccagtctggccctg
agggacccatggtcagatctccagcgcccccctcagtcctacttccctccctacagcctg
acgctgcgctacggcctggctgccacactctggctctgcatgggactgctgcagataatt
ttcttcgctgcgttccatgagcgttttgtggaggataagatccgccagtttgtggacctt
tgctccatcagcaacatctcggtgttgctgctgtcccacaggtgttttggttactacatc
cacgggcgctccgtccacagccacgctgacaccaacatggaggagatgaacatcaacctc
aagagagaggccgtgcgtacacacagagagacagacagagcgagcgagtgggagtctctg
tgtggtcagagaggtctccttcccaacacagacactcagaccttccagatctccatcacc
agccgactacgccagcagtacgaccgcatcctggagcctctcagcaggagaactgggcca
tcgcggttggtggacgcagcctcaggacacccctttgaccagagcaccaaagcctaccac
accatgaaccgtttcctaggatctgtcatagaccatgcccatcgggacatggaatacgtt
gtgagagacaaactgttttttgagagcgtcatagggatggagttcatggagcccatggac
aagagcatcttctacaatgatgagtcccattcgttcagtgacgtgctgttctatgggaac
gaagccactctgttgatctttgacacgctcttcttctgtgtggttgacctgggcgcacag
agcttcatactggcagccgtactcacatacgcacagcaaatgatctttcgattaatccgt
aacggtattgggcggagaaacctggccaacaaaacattggtggaccagagattccttata
tag
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