Coregonus clupeaformis (lake whitefish): 121542365
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Entry
121542365 CDS
T08357
Name
(RefSeq) partitioning defective 6 homolog gamma-like
KO
K06093
partitioning defective protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121542365
09144 Cellular community - eukaryotes
04530 Tight junction
121542365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121542365
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
121542365
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Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
7TM-7TMR_HD
Herpes_DNAp_acc
Motif
Other DBs
NCBI-GeneID:
121542365
NCBI-ProteinID:
XP_041707702
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Position
28:10040222..10043404
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AA seq
441 aa
AA seq
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MNRSLSKSQSSLQYCATVEVKSKYGAEFRRFSLNRSNPGKFQDFYKLLLRLHHLTSIDVM
IGYADIQGELLPINNDDNFCKAVSTAPTLLRIFIQRQEEVDYNNFCPNATVTRRRKVPVI
PLPRGNMNRKRPTVHISRPQDFRPISSIIDTDFLPASQRRVRLYRQGSEKPLGFYIRDGT
TVRVTPHGLEKVPGIFISRLVPGGLAESTGLLAINDQVLEVNGIEVMGKVLDQVTDMMIA
NSHNLIITVKPVNQRNNIVRAGSWMSGINSGSVSSLDYQSYHSMPICQSYHSMPICVGAY
SFTDDELQSDEDLDIVIERRLRNSSRRSSASTSTASRSQAWSQPQQSPRPSPRPSSRRPP
RRPYSVISSTSYRSQPSLTSPNLRLNRDLTLQRHYGSSPVVREMNGGVFNHSSLLTLRTE
LRRSLVLQRGGVEEDGMVITL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggagcttaagtaaatcgcagtcttctttgcagtattgtgcgacagtggaagtg
aaaagcaaatatggagcagagttcagaaggttttcccttaaccgctccaaccctggaaag
ttccaagatttctacaagctcctcctgcgcctgcaccatctaaccagcattgatgtcatg
attggctatgcagatatccagggagagctactacccatcaataacgatgacaacttctgc
aaggccgtgtccactgctcccaccttgctgcggatcttcatacaaagacaagaggaagtg
gactacaacaacttctgccctaatgccactgtgacacgccggaggaaggtgccagtgatc
cctctcccacgcggcaacatgaaccgcaaaaggcccacggtccacatcagcaggccgcag
gacttccgtcccatctcgtccattattgacacagacttcctgcccgcatctcagcgccgg
gtacgactgtaccgccagggctcagagaagcccctggggttctatatccgggatgggacc
actgtgagggtgactccccacggcctggagaaggtccccgggatcttcatctcacggctg
gtccctggaggcctggctgagagcacagggctgctggccatcaacgaccaggtgcttgag
gtgaatgggatcgaggtgatgggcaaggtgttagaccaggtgacagacatgatgatcgca
aacagtcacaatcttatcatcacggtgaagccggtgaaccagcgtaataacatagtgcgt
gccggcagctggatgtcggggataaactcaggcagtgtcagctctttagactaccagagt
taccacagcatgcccatctgtcagagttaccacagcatgcccatctgtgtgggagcctac
agcttcactgatgacgagctgcagagcgacgaggacttggacattgtgattgagagaaga
ctcagaaactcatcccgtcgctccagtgcctcaacctccacagcctcccgttcccaggct
tggtcccagccccagcagagtcctaggccttctcctaggccatcctcccggcgccctccc
cgtcggccttactctgtcatctcctcaacctcctatcgctcacagcccagcctcactagc
ccgaacctcagactgaacagagacctgaccctacagcggcactacggcagcagcccagtc
gtcagggagatgaacggaggtgtgtttaaccacagcagcctgctcaccctgaggacagag
ctacgacgtagcctggtgctacagaggggaggggtggaggaggacggaatggtcatcacc
ttatga
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