KEGG   Coregonus clupeaformis (lake whitefish): 121542367
Entry
121542367         CDS       T08357                                 
Name
(RefSeq) syntaxin-3-like isoform X1
  KO
K08486  syntaxin 1B/2/3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    121542367
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121542367
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121542367
Membrane trafficking [BR:cclu04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    121542367
Exosome [BR:cclu04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   121542367
  Exosomal proteins of other body fluids (saliva and urine)
   121542367
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 FlaC_arch PI_PP_C YtxH Relaxase_C OEP IMPa_helical DUF6827 Fib_alpha
Other DBs
NCBI-GeneID: 121542367
NCBI-ProteinID: XP_041707706
LinkDB
Position
3:23276568..23304248
AA seq 289 aa
MKDRLEQLKATCDNDDEEVEIAIDNAAFMDEFFSQIEDIRNSIDKIDENVCEVKKLYSVI
LSAPTSDQKTQDDLEAVTNDIKKMANNARNKLKTIERNLESEEEERISADMRIRKSQHAV
LSRKFVNVMTKYNEAQVDFRERSKGRIQRQLEITGKATTDEELEEMLEGGNSAVFTSGIM
DSGISKQALSEIEARHKDIVRLESSIKELHDMFVDIAMLVESQGDIVNNIEAQVCKAQDH
ITVAKTETKKAIRYQSKARKKIVIIVAVLIIVLAIVALIIGLSVGLKER
NT seq 870 nt   +upstreamnt  +downstreamnt
atgaaggaccgattggaacaactcaaagctacatgcgacaatgacgatgaggaagtggaa
attgctattgacaatgcagcttttatggatgagttcttctctcagatcgaggatatcagg
aacagtattgataagattgatgagaatgtgtgtgaagtcaagaagctctactcagtcatc
ctgtctgcccccacatcagaccagaaaacgcaggatgacttggaggctgtcaccaatgac
atcaagaagatggctaacaacgcccgcaacaaactcaaaaccatcgagaggaatctggag
tctgaggaagaggagaggatttcagctgacatgcggatacgcaaatcacagcatgcagtg
ctgtccaggaagtttgtgaacgtgatgactaagtacaatgaggcccaggtggacttcagg
gagaggagtaaaggacgcatccagagacagctagagatcactggcaaagccacgacagac
gaggagcttgaagagatgttagagggtggaaactcggccgtcttcacttcagggatcatg
gactctgggatctccaagcaggctctcagtgagatcgaggcgcgacacaaagacattgtg
cgtctggagagcagtatcaaagagctgcacgacatgttcgtagacatcgccatgctggtg
gagagccagggtgacattgtaaacaatatagaagctcaagtgtgtaaagcgcaggatcat
ataacagtggctaagactgagaccaaaaaagccatcaggtaccagagcaaagcacgcaag
aaaattgtgataatagtggcagttctgattatcgtgctggccatagtggctctgattatt
gggttgtcggtgggattgaaggagagatga

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