Coregonus clupeaformis (lake whitefish): 121542411
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Entry
121542411 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121542411
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121542411
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121542411
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
121542411
NCBI-ProteinID:
XP_041707745
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All DBs
Position
3:23391703..23399796
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AA seq
632 aa
AA seq
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MDPPRTRSRSRSGFFHYGMNGGGNGNNAINNGNMMNASGGIGVNYPQQNNPGWVPHGARS
SYSENQHTQGNYLSGGAQRHPSHGAHRHPSTGGVLHFHPDNVCSDERDKMEDSPSPKRQR
LSQQCILDLSSAPPPTPSSPIRPWELPHTPTTWATPPPSRRPHPHYLPERCHTPVRTRRS
PPMRRQRGRRDRLTSHPHHHSHPHHHHHHYHHHHHNPHHHHSHPHPHHGLSAGPQDENYR
HLVPPQSYPYNQQPPRGPEERPYHSPNLSPRPLLHPPNLSPRLMHPAAHPQHSHPHPHPP
QQQSSVVLDLHDQGSSQVSYPVSPPGAPPVLSPRSAPQQLPACSVVFSGQHYPVCSVPPS
VLQTCSVQHLPMPYPFPSLLSSDTFLLPPPHLSHHPPHLSHHPPHLPQPGQFGPYPTQQA
RSPLQRIENDVELLGEHLSLGAGLHYPPAAHPGLPPHSTQLHFLSHDPLPQEFFGVSYPS
FMPRRIPGRRYRSQQPLPPSPYHPSFLPYFLSMLPVQPTGPAISLELDVDDGEVENYEAL
LNLAERLGEAKLRGLTKGDIEQLPSYRFNPNNHQSEQTLCVVCMSDFESRQLLRVLPCSH
EFHGKCVDKWLRANRTCPICRADASEVQRDSE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggatcccccgaggactcggtcgcggtcgcgttcaggtttctttcactatggcatgaac
ggtggtggcaacggcaataacgcaatcaacaatgggaacatgatgaatgccagtggaggg
atcggggtgaattaccctcaacagaacaaccccggctgggttccgcacggggcgcgcagc
agctattcggaaaaccagcacacccaggggaactatctgtccggtggggcgcaacgccac
ccttcgcacggagcacacagacatcccagcaccggaggggtcctgcacttccaccctgat
aacgtctgcagtgatgagcgggacaagatggaggacagtcctagccctaagcgacagcgt
ctttcccagcagtgtattttagatctaagctctgcccctccccccaccccatcctctccc
atccgtccctgggagctaccccacacccccacaacctgggccacacccccacccagtcgc
aggccacacccccactacctgccagagcgatgccacacacccgttcgcacccgccgcagt
cctccaatgagacgccagcgtggccgccgtgaccgtctcacctcccaccctcatcaccac
tcccacccccaccaccatcaccaccactaccaccaccatcaccacaaccctcaccatcat
cattctcaccctcacccccaccacggcctctcagcagggcctcaggatgagaactaccgc
caccttgtcccccctcagagttacccctacaaccagcaacctccccgggggccagaggaa
cgcccctaccactcccccaacctatccccacgccccctcctccaccctcctaacctgtcc
cccaggctgatgcaccctgccgcccacccccagcactcccatcctcatccccacccccct
cagcagcagagcagtgtggtgctggacctccatgaccagggttcttctcaggtgtcgtat
ccggtctctccccctggcgccccccccgtcctgtccccccgctctgccccccagcagctc
ccagcatgctcggtggtcttcagtgggcagcactaccctgtctgcagtgtccctccatcg
gttctgcagacatgctctgtgcagcacctgcccatgccctacccgttcccctccctgctg
tccagtgacacctttcttctgccccctccccacctgtcccaccacccccctcacctctcc
caccatcctcctcacctcccccagcccggacagtttggtccctaccccacacagcaggcc
agatcgccattacagaggatagagaatgacgtggaactgttgggggagcacctgtcctta
ggggctggtctccactacccccccgcagcccaccccggcctgccaccccactccacacag
ctccacttcctttcccatgatcctctgccacaggagttctttggagtgtcgtatcccagc
ttcatgccacgacgtatcccaggacgacgctaccgctcccagcagccactgccaccctcg
ccttaccaccccagtttcctgccttacttcctctccatgctgccagtccagcctacaggc
cctgccatcagcctggagctagacgtagatgacggagaggtggagaactatgaggccctt
ctcaacctggccgagcgtctgggagaggccaaactcagaggactgaccaagggagacatc
gagcagctgccttcctataggttcaaccccaacaaccaccaatcagaacagacgctgtgt
gtggtgtgtatgagtgactttgagtctcgtcagctgctgagagttctaccctgcagtcat
gagttccatggaaagtgtgtggacaagtggctcagggctaacaggacgtgtcccatctgt
agggctgatgcctcagaggtccagcgagactcagagtga
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