KEGG   Coregonus clupeaformis (lake whitefish): 121542415
Entry
121542415         CDS       T08357                                 
Name
(RefSeq) collagen alpha-1(X) chain-like
  KO
K23284  C1q-related factor
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121542415
Membrane trafficking [BR:cclu04131]
 Endocytosis
  Phagocytosis
   Opsonins
    121542415
SSDB
Motif
Pfam: C1q BclA_C ATG16 Yuri_gagarin GIT_CC SlyX Crescentin Tup_N CENP-F_leu_zip DUF641 DUF4795 CCDC113_CCDC96_CC YjzC CFAP58_CC Cep57_CLD_2 GAS CCDC22_CC
Other DBs
NCBI-GeneID: 121542415
NCBI-ProteinID: XP_041707746
LinkDB
Position
17:1753103..1755177
AA seq 275 aa
MRGAVALLVLLFCLSGTWAQGESRRVRENGTTQQGHSELGESSDNGGSHICAELKALRDK
VHSMGTILVEQRVELRYMGNRLTASESQVEELKRDNAALETRLSVSERLGEELERENAAQ
VEELSALRSQVEELKRENTDRPKVAFSAGLTNSGKVGPFNTETQLIYTKVFTNIGNTYNP
NTGIFTAPVRGVYYFRFSMVSYENELLGGLNMYRNGQRILHNGQYYNAGNEYVCNGVTLH
LQKGDTVHMRLPKGWAVYDDDSNHSTFSGFLLFPM
NT seq 828 nt   +upstreamnt  +downstreamnt
atgaggggtgctgtagctctgctggtgttgctgttctgtctgtctgggacatgggctcag
ggagagagtagaagggttagagagaatggcaccactcaacagggtcacagcgaactgggg
gagagcagtgataatggtggttctcacatctgcgctgagctgaaagcactgagagacaaa
gtgcacagtatgggaaccatcctggtggagcagagagtggagctgaggtacatgggaaac
agattgacagctagtgagagccaggtggaggaactgaagagagacaatgcagccctggag
accagactgagtgtcagtgagaggctgggagaggagctggagagagagaatgcagcccag
gtagaagaactgtcagccttgcggagccaggtggaggagctgaagagagagaacacagac
agaccaaaggtggccttctctgctggtttgactaactcaggaaaagtaggacctttcaat
actgagactcaactgatctacaccaaagttttcacaaacatcggcaacacctacaaccca
aatacaggtatcttcacagcacccgtgaggggagtctattacttcagattctctatggtt
tcttatgaaaacgaattgcttgggggtctaaacatgtacaggaatggccagagaatattg
cataacggtcagtattacaatgctgggaatgagtatgtgtgcaatggagtgactctgcat
ctgcaaaagggtgataccgtccatatgcgccttcccaaaggctgggcagtgtatgacgat
gattctaaccacagcaccttcagtggcttccttctcttccctatgtga

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