Coregonus clupeaformis (lake whitefish): 121542427
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Entry
121542427 CDS
T08357
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2-like
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121542427
04082 Neuroactive ligand signaling
121542427
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121542427
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121542427
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
DUF4537
Motif
Other DBs
NCBI-GeneID:
121542427
NCBI-ProteinID:
XP_041707759
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Position
3:23428906..23452852
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AA seq
502 aa
AA seq
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MAAPVTAALALLVLTVATALGAEIEERLVTYLLSPERYNKLIRPAVNKSQQVTIHIQVSL
AQLISVNEREQIMTTNCWLTQVWNDYRLMWDPEEYEGIKKVRLPSQHIWLPDIVLYNNAD
GNYEVSFYSNTVVSNNGEVYWLPPAIYKSACKIEVRDFPFDQQNCTLKFRSWTYDHTEID
LILLSDFASRDDFKPSGEWDIVSLPGRKNEDPSDITYLDITYDFIIKRKPLFYTINLIIP
CVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFA
MVLVTFSIVTSVCVLNVHHRTPSTHTMPPWVKRLFLHRLPSFLFMRRPGSSNIRERFRQK
HQRRSYSDGAVAVAPATGGMGVVEGSGIGGADSFYVNEESAKRYGWKISDLSENTEFRKR
MTVKCHADIEEAVDGVRYVAEKMKSEDNDEGVIEDWKYVAMVIDRLFLWIFVFVCITGTL
GLFMQPLFQSYNTPTADDLEQN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcagccccggtgacagcagcgctcgctctcctggttctcacagtggcaactgccttg
ggcgcggagatagaggagcgattggtgacctacctgctgtctcccgagcgctacaacaaa
ctgatcagacctgctgtcaacaagagccaacaggtcaccatccatatacaggtgtccctg
gcccagctcattagtgtgaatgagagagaacagatcatgaccaccaactgctggctgact
caggtatggaatgactacaggttgatgtgggacccagaggagtatgagggcattaagaag
gtccgcctcccatctcaacacatctggctgcctgacatcgtcctctacaacaatgctgat
gggaactacgaggtgtcattctactccaacacggtggtctccaacaatggagaggtgtac
tggctgccccccgccatctacaagtcggcctgcaagattgaggtacgcgacttccccttc
gaccagcagaactgcacactcaagttccggtcctggacctacgaccacacagagatcgac
ctgatcctgctcagcgatttcgccagccgtgacgacttcaagcccagtggtgagtgggac
attgtgtctctgccgggacgcaagaacgaagacccctctgacatcacctacctggacatc
acctatgacttcatcatcaagcgcaagccactgttctacaccatcaacctgatcatcccc
tgtgttctcattacctctctggctatcttagtgttctacctgccgtctgactgtggagag
aagatgactctctgtatttcagtcctcctggccctcactgtgttcctgctgctgatctcc
aagatcgtcccgcctacgtctctagctgtccctctcatagggaagtatctgatgtttgcc
atggtgctggtcaccttctccatcgtcaccagtgtgtgtgtgctcaacgtgcaccaccgc
acgccctccacacacaccatgcccccctgggtcaaacgtctcttcctgcaccgtctcccc
tccttcctgttcatgcgtcggccgggcagctccaacatccgagagaggttccgccagaag
caccagcggcgctcctactccgacggggcggtggcagtggccccggccacggggggaatg
ggggtggtagaggggtctgggataggcggggccgactccttctatgtgaacgaggagtcg
gccaagcggtacggctggaagatcagcgacctgtcggagaacacagagttcaggaagagg
atgacggtgaagtgtcacgcagacattgaggaggctgtggacggggtgcgctacgtcgcc
gagaagatgaagagtgaggacaacgatgagggggtcattgaggactggaagtatgttgcc
atggtgattgaccggctgttcctgtggatatttgtgtttgtgtgcattactgggactttg
gggctgttcatgcagcccctcttccagagctacaacacgcccacggcagacgacctggag
cagaactga
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