Coregonus clupeaformis (lake whitefish): 121542434
Help
Entry
121542434 CDS
T08357
Name
(RefSeq) histone deacetylase complex subunit SAP18
KO
K14324
histone deacetylase complex subunit SAP18
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
cclu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121542434
03015 mRNA surveillance pathway
121542434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121542434
03036 Chromosome and associated proteins [BR:
cclu03036
]
121542434
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121542434
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
121542434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
121542434
NCBI-ProteinID:
XP_041707763
LinkDB
All DBs
Position
28:complement(22717021..22720161)
Genome browser
AA seq
156 aa
AA seq
DB search
MALESRITQEEIRKIPEKPIDREKTCPLLLRVFTTNSGRHHRVDEFARGQVPSSELQIYT
WMDASLKELTSLVKEVYPEARKKGTHFGFAIVYPEPKRNGYRVKDIGNTVSGRKGENDSM
TLQSQRFQIGDYLDIAITPPNRAPPLNPRMGMGRPF
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggctcttgaatcaagaatcacacaagaagagattcgaaaaataccagaaaagcctatc
gaccgggaaaagacttgtcctcttctgctgcgggtatttacgaccaacagtggcaggcat
cacagagtggacgaattcgcacgaggacaagtcccttcaagtgagctgcaaatctacaca
tggatggatgcctcactaaaggagctgaccagcctggtgaaggaggtgtaccctgaagct
cggaagaaaggaacacactttggtttcgccatcgtttatcccgagcccaaaagaaatggc
tacagagtgaaagacatcggcaacactgtgtcaggcagaaagggggaaaatgactccatg
acgctacagtcccaacgcttccagataggagactacctggacatagccatcacaccaccc
aacagagctccgccgctaaacccacgcatgggcatggggaggcccttctga
DBGET
integrated database retrieval system
