Coregonus clupeaformis (lake whitefish): 121542437
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Entry
121542437 CDS
T08357
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-3-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121542437
04082 Neuroactive ligand signaling
121542437
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121542437
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121542437
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Pyr4-TMTC
LAT
MJ1145
Red1
Motif
Other DBs
NCBI-GeneID:
121542437
NCBI-ProteinID:
XP_045065207
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Position
3:23475252..23494581
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AA seq
540 aa
AA seq
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MSSSRKVTVLLLLVVLTAQGCLSSKGEDRLFRKLFRRYNQFIRPVENVSDPVTVEFEVSM
SQLVKVDEVNQIMETNLWLRHVWNDYKLKWVPIEYDGLEFIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKFDGTITWIPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPAWVRSVFLGLLPKVMLMRRPVDHGCPSSV
GSGCVGGGGASGTGKKRKNSIGGGIGGGIGGGCVQVDGFAVAAERGQVGEMNCVEYSEVQ
NKPKFPCKGKEVPIPTVPPVVPPPAPSEPDLPKLPRAPNAPPNVSAVVAFSVVSPEIKQA
IESVKYIAENMRTRNKAKEVEDDWKYVAMVIDRIFLWVFVTVCITGTLGLFLQPLIGFFT
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctccaggaaagtcaccgtgctgcttctgttggtggtcctgacagcgcaaggc
tgtttgtcatctaagggggaggacaggctgttcaggaagttattcaggagatacaaccag
ttcatcagaccagtggagaatgtctctgaccctgttactgtggagtttgaggtgtccatg
tcccaattggtcaaagtggatgaagtcaatcagattatggagaccaatctatggctgaga
catgtctggaatgactacaagctaaaatgggttcccattgaatatgacggacttgagttc
attcgtgtgccctccaataagatatggaggccggacattgttctctacaacaatgctgtg
ggagatttcctggttgaggacaagaccaaagctctgctgaagtttgacggcaccatcacc
tggatcccccccgccatctttaaatcctcctgccccatggacatcacctacttcccgttc
gactaccagaactgctccatgaagtttggctcctggacctacgacaaggccaagatcgac
ctggtgctcatagggtcaaaggtgaacctcaaagacttctgggagagcggcgagtgggag
atcattgacgcgccgggctacaaacacgacatcaagtacaactgctgtgaggagatctac
ccagacatcacctactctttctacatcagacgcctccctctcttctacaccatcaacctt
atcatcccctgtctcctcatctccttcctcaccgtcctcgtcttctatctcccctctgac
tgtggagagaaggtgactctctgtatctccgtcctcctgtccctcactgtgttcctcctg
gtcatcactgagaccatcccgtctacatctctggtcatccccctcatcggggagtacctc
ctcttcaccatgatcttcgtcaccctctccatcgtcatcactgtgttcgtgctgaacgtc
cactaccgtacgcccatgactcacaccatgccagcctgggtcaggtctgtgttcctgggg
ttgctgcccaaggtgatgctcatgaggaggcctgtagaccacggctgcccctcctccgtg
gggagtggatgtgtgggaggaggaggagcgagtggaacggggaagaagaggaagaacagc
attgggggaggaatagggggagggatagggggagggtgtgtgcaggtggatgggtttgcg
gtcgcagccgaaagggggcaggtgggggagatgaactgtgtggagtacagtgaagtgcaa
aacaagccgaagttcccctgtaaggggaaagaggtgcccatccccaccgtacccccagtg
gtgccccctcctgccccttctgagccggacctacccaaactgcctcgagcacccaatgcc
ccgcccaacgttagcgcagtggtggccttctccgtggtgtcaccagagatcaaacaggcc
attgagagtgtcaagtacatcgctgagaacatgaggacacgcaacaaggccaaagaggtg
gaggatgactggaagtacgtagccatggtgattgacaggatctttctgtgggtgtttgtg
acggtgtgtatcactggaactctgggactgttcctacagcctctcatcggcttcttcaca
tga
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