Coregonus clupeaformis (lake whitefish): 121542570
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Entry
121542570 CDS
T08357
Name
(RefSeq) WASH complex subunit 5-like
KO
K18464
WASH complex subunit strumpellin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121542570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121542570
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Others
WASH complex
121542570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
Motif
Other DBs
NCBI-GeneID:
121542570
NCBI-ProteinID:
XP_045073259
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MVDFLAENNLCGQAVLRIVSRGNAIIAELLRLSEFIPAVFRLKDKSDQQKYGDIICDFSY
FKGPEYYDSKVEAKPELQDLDEEFRENNIEILSRFYLAFESVHKYTVDLIRYLDDLYEGV
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKMDGEVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTGYSSQSGAKRPANYPESYFQRVPISATFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALANQAAMLYVCLYFTPSILHTQQAKMREIVDKYFPDNWVISVYMGITVNL
VEAWEPYKAAKIALNYTLDSANIREQASRYSVSMDGLRPQIQQLLKEGFLREEIVLDNIP
KLLNCLRDCNVAIRWLMLHTADSAYDPNNKRLRQIKDQVINDSKYNPKILFQLLLDTAQF
EFTLKEMFKQMLSEKQLKWESYRTEGAERMTELAEVFSGVKPLTRVEKNENLQAWFREIS
KQIESLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQIIDSFTFIMQESIRANPSMVTKLRATFLKLASALDLPLLRI
NQANSPDLLSVSQFYSGELVTYVRKVLQIIPESMFTSLAKIIKLQIHAIMEVPTRLDKDK
LKDYAQLGARYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVRRVAY
ALHKGLIFNPKAKTSELMPKLKEMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNSFLRTKIQDWESVYQSTHIPIPKFPSVDESATFIGRLCREILRITDPKGTCYM
DQLNTWYDLKTHQEVTNNRLFSEIQDTLGTFGLNGLDRLLCFMIVKELQNFLTVLQKTIL
RDKAMVNVFKAMLSAVNPVKGIVGNASKAYTNAVAKTQKIWGPYLESIMKVGQMQILRQQ
IANELNYSCKFDSKHLAAALENLNKSLLADIEAHYQDPSLPYPKEDNNLLYEITASLEAA
GIHNPLNKIYITTKRLPYFPIVNFLFIIAHLPKLQYSKNQGMTCRKATDPVDWPPLVLGL
LTLLKQFHSRYTEHFLALIGQFIRSIMDQCTSQRIPDMPSDVVGALMFLEDYVRYTKLPR
KVAEAHVPSFIFDEFRTVL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtggatttcctggcggagaacaacctatgtggccaggccgtgctgaggatcgtgtcc
cgggggaacgctatcatagccgagctcctccgcctctcggagttcatccctgccgtcttc
aggctcaaagacaagagcgaccagcagaaatatggagacatcatctgcgacttcagctac
ttcaagggtccagagtactatgacagtaaggtagaagccaaaccagagcttcaggatctg
gatgaagagttccgggagaacaacatagagatactctcacgattctacctggcttttgaa
agtgtccacaagtacaccgttgatctaatcaggtacctggacgacctgtatgaaggtgtc
tacatccagcagaccctggagactgtgctgctgaatgaggatggaaaacagctcctgtgc
gaagccctgtatctctatggggtcatgctgttggttatcgaccagaagatggacggggag
gtcagagagaggatgctggtgtcctactatagatacagtgccgctcgctcctcagcggac
tctaacctggatgacatctgtaagctgctgcgtagcacagggtactccagccagtcaggg
gccaaacggccagctaactaccctgagagctacttccagagagtgcctatcagcgccacc
ttcatcagcatggtgatcggcaggctgcgctctgatgacatctataaccaggtgtctgcg
taccccctgcctgagcaccgcagcacggcgttggctaaccaggctgccatgctgtacgtc
tgtctctacttcaccccatccatactgcacactcaacaggccaagatgagggagatagtg
gacaagtacttccctgataactgggtcatcagtgtatatatggggatcactgtgaatctg
gtggaggcctgggaaccatataaagctgccaagatcgccctcaactacaccctggactca
gccaacatcagagagcaggccagtcgttattcagttagtatggatggcctgaggccccag
atccagcagctgctgaaggaagggttcctgagggaggagatagtcctggataacatcccc
aagctgctcaactgtttaagggactgtaatgtggcgatacgctggctgatgctacacact
gcagactctgcctatgatcccaacaacaagcgtctgcgacagatcaaagatcaggtgatc
aacgactccaagtacaaccccaagatcctcttccagttactcctagacaccgcccagttt
gagttcactctcaaagaaatgttcaagcagatgctgtccgagaagcagctgaaatgggag
agctatagaacagagggagctgagaggatgacggagctggctgaggtgttctctggggtc
aagcctctgaccagagtggagaagaatgagaacctgcaggcatggttcagggagatctct
aagcagatagagtctctgaactatgaggactccaccgctgcaggcaggaagaccgttcag
ctgatacaggcccttgtagaggttcaagagttccaccagttggagtccaacctgcaggtg
tgtcagtttctggctgacaccaggaagttccttcaccagatgatcaggaccattaacatc
aaggaggaggtcctgatcaccatgcagatagtaggggacctgtcctacgcctggcagatc
atagacagcttcacgttcatcatgcaggagagtatcagagcgaacccatccatggtgacc
aaactacgagccacctttctaaagttggcgtctgcgttggacctgcctctgctgcgtatc
aaccaggctaacagtccagacctgctcagtgtttctcagttctactccggggagctggtg
acctacgtcagaaaggtgttacagatcatccctgagagcatgttcacctccctggctaag
atcatcaagctgcagatccatgccatcatggaggttcccaccagactggacaaggacaag
ctgaaggactacgctcagctgggggctcgctacgaggttgccaaactcacccacgccatc
tccatctttactgaagggattctgatgatgaagactacactggttggaatcatcaaggtg
gatcccaagcagctcctggaagatggtatcaggaaggagttggtgaggagagtagcatat
gctctacacaaaggacttatctttaaccccaaggctaagaccagcgagctgatgccgaag
ctcaaggagatggcagccaccatggatgggttctaccggtcctttgagtacatccaggac
tatgtctccatctacggcctgaagatctggcaggaggaagtctctcgcatcatcaactac
aacgtggagcaggagtgcaacagcttcctacgcaccaagatccaggattgggagagtgtc
taccagtcgacccatatccccatccccaagttcccctcggtcgatgagtcagccaccttc
atagggcgactctgtagagagatcctccgcatcacagaccccaaagggacgtgctacatg
gaccagttgaacacctggtacgacctgaagacccaccaggaggtgaccaacaaccgtctg
ttttctgagatacaggacaccctggggaccttcggcctcaacgggctggacaggctgctc
tgcttcatgatcgtcaaggaactgcagaacttcctgacggtgcttcagaagaccatcctg
agggacaaggctatggtgaacgtctttaaagccatgctgagcgctgtcaatcccgtcaaa
ggtattgtgggaaatgccagtaaagcgtacaccaacgctgttgccaaaacacagaagatc
tgggggccatacttggaatcgatcatgaaggttggtcagatgcagatcctgaggcaacag
atagccaacgagctgaactactcctgcaagttcgactccaaacacctcgctgccgcactg
gagaacctcaacaagtctctactggctgatatagaagcccactaccaggaccccagcctt
ccataccccaaggaggacaacaatctactgtatgagatcacagcctctctggaggcagca
ggaatacacaacccactcaacaagatctacattacaaccaagcgcctgccttactttcct
atcgtcaacttcctcttcatcatcgctcatctgcctaaactgcagtacagcaaaaatcaa
gggatgacgtgcaggaaagccacagacccggtagactggcctcctctggttctaggcctg
ctcactctgctcaagcagttccactccagatacacagagcacttcctggctctcattggg
caattcatacgctctatcatggaccagtgcaccagccagaggatcccggacatgccgtct
gatgtggtgggagcactgatgtttctggaagattacgtacgctacaccaagctgcctcgc
aaggtggccgaggcccacgtgccaagtttcatctttgacgagttcaggacagtcctgtga
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integrated database retrieval system