Coregonus clupeaformis (lake whitefish): 121542601
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Entry
121542601 CDS
T08357
Name
(RefSeq) pleckstrin homology domain-containing family G member 4B isoform X1
KO
K23860
pleckstrin homology domain-containing family G member 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121542601
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
121542601
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
RHG20_PH
PH_10
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
121542601
NCBI-ProteinID:
XP_041707958
LinkDB
All DBs
Position
17:22417065..22488216
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AA seq
1873 aa
AA seq
DB search
MLSLDKMHSRAKSRSCDNYLSIKDSESLDSCIQSTLSALYPPFSATASTVLWQLFSVVER
QYRGDGLRCLIDFLLPAKRILQSIQQETCVRFHGLLFYHEGWPLCINEKVVLQLAPLHKV
RLKQGDFYLQVVPLGRKAAKLVIKCLSASGQAIAEIPIPENMYGSVFTADFLQNVTRERN
LHPLQNWLLTTGTVVYRTPWKNVVNPLFVSSTADAIMQARGGSTGFRGQLSACSTSGSTG
TLDSHRSSHESLQSQGADSTFSEPAILSRRVHVMDPSSISRRSQHDPNPGLHLMENHNQN
HSLRAAPDSHFCSPQTDRLAGEGGGGPVQGQREGEEGQGGTRERTRTLSFNTDLSNPSPR
RPRHARDSVSFETRRLFRKSYMEALQNPMNLGSSSESILEEGPENSPACPGLSPLSSRED
TSSPAATPGSSPSTPTTTQREQGPRGARLGGARAWLGGDPDSPRLSPSTPLLYLQRGLRN
AGGLENRAERRSKSLERTNKVAQVKGHRARSSSGGSASSGVPSPKKLMNGYALRFGRLDL
EAAFSSSDSRRSVRDETAIHEGGSSTDPRRHSHDGAQSHHHPPKPSNEVLIQLAPAPGSG
SPPNCHLHLPSLVSEVNPELLASGAIILPGNRDLGGRPVLQVCTRGRVWAGESCTAKNLT
CLLGYYYSTLRSERQDQGLTVLVDTRRQQPSPALFSSLSELQVLLPNALYSVLLLVDKEA
TIKPERDITNVQTELVTSLKTLLKHIDSSQLTRDLDGTFPYDHNHWVTFRQKIEPFASSC
SVALSSLQSSIAMLSSSSNLDSTKEVSEVLEQQRSLMKCVLEDTSLNRLRLEGGTVLARI
RKDEACENHNYRDAVDMVNVLYNQVDEEVHKLVILSNKSLKQLESLLEVRRFEEQTEQIK
VWFSVEGAKHITPLDSLHLSLATLKDMRQSLEQFFEESVQQQKQGLLLVRQSGESLPSSA
LLDFKQHLGSILGGVERRKHQLDILTNLYEFYDSANQWMEHCQDYFRQLNLEDSGVSLPP
AVLQILQDYQTEASKFSLDNFSTLSDMVLSLDSPRQTQQWNVLWTKCQQTKNQLEETLAQ
ATAAATAASNSSASKSAASNSAAGNLTTDPSETADRQGGCTHTEQHGAAAEDLVLPELPT
LGSRVMVSSLEFEEDTKLHSAGHFSSNSNNNKSPSSSSSCSFTSSSLFPFPPAPEGDPLF
KLRQSPSLFDDTDSDCTIDSLGAASCYSEPVYSSSGTPLHHHHQHQHHHQHRKQPLKKIM
KKTLSYELTAAQDGGGGHVDTSHLHGYTGVYIKGLEVANNVSVEKKLQRPDVVSPALGRS
RSMSSPTRHSEGDGKKHSSKVQHIMDEMISTEREYVRSLSYVIEHYFPEMERLDLPQDLW
GKRSIIFGNMEKLCNFHCQYFLKELEASAHSPLSISSCFLRHEDQFGMYALYSKNKPQSD
ALLTSHGNGFFKNKQLELGDKMDLASYLLKPIQRMSKYALLLKDLIKECGHSQEQELSDL
RTAEEMVKFQLRHGNDLLAMDAIRGCDVNLKEQGQLRCQDEFIVWCGRRKYLRHVFLFED
LILFSKTKKIEGGYDLYIYKQSYKTAEIGMTESVGDSGLRFEIWFRRRKSQDTFILQASS
GEVKAVWTAIIGKILWRQALRNREVRLKEMVSMGIGSKPFMDIKPSDAAISDRAIDYIMK
GSESRTRASIAVSSFDHSTPFKRPHSTISNSSTSSSSSQSSSSLLGSLNLHLYPSPAHQH
PHALGSVPSFSHWPYDCIEEDELEQDTGSQPSMITESSGETSSQCISSDSVTGLSSLALP
IPGHGRPNIIISTFPSDSTSSFLCSSTPLGSSHPQMAPPPAPFPKDQDLQAQGSIFITAS
KTSHITIGLSTVV
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcactggacaaaatgcactcccgagccaagtccaggagctgtgacaactacctg
agcattaaggactctgagtccctggacagttgtatccagagcaccctgtctgcactgtac
cctccattcagtgccaccgcgtccaccgtcctgtggcagctgttcagcgtggtggagaga
cagtaccgtggggacggactccgatgcctcatcgacttcctacttcctgccaagaggatc
ctgcagagcatccaacaagagacttgtgtgcgtttccacggcctgctgttctatcatgag
ggttggcccctctgcatcaacgagaaggtggtcctgcagctcgcccctctccacaaggtc
cgtctgaagcagggagacttctacctgcaggtggttcctctgggccgcaaggctgccaag
ctggtcataaaatgtctgtctgccagcggccaagccatcgcagagatccccatcccggag
aacatgtacggcagcgtcttcaccgctgacttcctgcagaatgtgactcgcgagcgcaac
ctccacccgctccagaactggttgctcaccaccggcaccgtcgtgtaccggacgccgtgg
aagaacgtggtgaatcctctgttcgtcagcagcacggccgacgccatcatgcaggcacgg
ggcggtagcacgggcttccgtggccagctcagcgcctgcagtaccagtggatccacggga
accctagactcccaccgcagctcccacgagtcactacagtcccagggggcagactcaacc
ttctcagagcctgctatcctgagcaggcgggtccatgttatggaccccagcagcattagt
aggaggtcccaacatgatcccaacccaggacttcacctgatggagaaccacaaccaaaac
cacagcctgagagcagctcctgactctcacttctgcagcccacagacagacaggctggct
ggggagggtggtggtggtccggtacagggccagagggagggggaggagggccagggtggg
accagagagaggaccaggaccctgtcgttcaacaccgacctcagtaaccccagccctcgc
cgcccccgccacgccagggactctgtgtccttcgagacccggagactgttccgtaagtcc
tacatggaggccctgcaaaaccccatgaaccttggctctagctcagagtccatcctggag
gaaggaccagagaacagccctgcatgcccaggtctcagccctctcagctccagagaggac
acctcatccccagccgcgacccctggtagcagcccctccacccccaccaccacccagaga
gagcaagggcctcgtggggccaggctagggggggccagggcatggctgggtggggacccc
gactccccccgactctctcccagcacgcctctcctgtacctccagaggggtctgaggaac
gcggggggcctcgagaaccgggctgagaggcgctccaagtctctggagaggactaacaag
gtggcccaggtcaaagggcaccgggcgcgctcctcctccgggggctcggccagcagtgga
gtcccctcaccaaagaagctgatgaacggatacgccctgcgctttggacggctggacctg
gaggctgccttctccagctcagacagcaggagaagtgtcagagacgagacagcgatccat
gaaggtggatccagcactgaccccaggcggcacagccatgatggagcacagtcacaccat
cacccccccaaaccttctaatgaagtcctcatccagctggccccagccccagggtcaggg
tcccctcctaactgtcacctccacctccccagcctggtgtcagaggtcaaccccgaacta
ctggcctctggggccatcatcttacctggtaacagagacctcggcgggcgtccggtgctg
caggtgtgcacgcgggggagggtgtgggctggggagagctgcacggccaaaaacctcacc
tgtctactgggttactactattcaacgctccgtagcgagaggcaggatcaaggcctaacg
gtgctggtggacaccaggagacagcagcccagtcctgctctgttctcgtctctgtctgaa
ctccaggtgttattaccaaatgcactttactccgttctactgcttgtggacaaggaggca
actatcaagcctgaaagagacattactaatgtacagactgagctcgtgacgtctctgaag
accctgttgaagcacatagactccagtcagctcactagagacctggatggaacattcccc
tacgaccacaaccactgggtcaccttcagacagaaaattgagccttttgccagcagttgc
agcgtggctctgtcctccctccagtcttctatcgcaatgctgagcagcagcagcaacctg
gatagcactaaggaggtatcggaggtgctggagcagcagcggtctctgatgaagtgtgtg
ttggaggacaccagtctgaacagactgaggctggagggaggaacagtcctggcccgtatc
aggaaggacgaggcctgtgagaaccacaactacagggatgcagtggacatggtgaatgtc
ttgtataaccaggtagatgaggaggtccataaactggtgatcctctccaacaagtccctg
aaacagctggagagtctgctggaggtccgcaggtttgaggaacagacagagcagatcaaa
gtatggttcagtgtggaaggagcgaagcacatcactcccttggactctctccatctctct
ctggctacgctcaaagacatgaggcagagtttggaacagttctttgaggagtcagttcag
cagcagaagcagggtttactgctagtcaggcagtcaggggagtctctccccagctcggcc
ctgctggacttcaaacagcacctgggatccatcctgggcggagttgagaggaggaagcac
cagctagacatcctcaccaacctctacgagttctacgactctgctaaccagtggatggag
cactgccaggactacttcaggcagctgaacctggaggacagtggtgtgagcctccctcct
gcagtacttcagatcctccaggactatcagactgaggcctccaagttctccctggacaac
ttcagcaccctcagtgacatggtcctgtccctggatagcccccggcagacccagcagtgg
aacgtcctgtggaccaagtgtcaacagaccaagaaccagctggaggaaaccctggcccag
gccacagcagcagctactgcagcctctaactcttcagcctctaaatctgcagcctctaac
tctgcagccggaaatctaaccacagacccctcagagactgcagacagacaggggggctgc
actcacacagagcagcacggggctgctgcagaggaccttgttttacctgagttgcccact
ctagggtcaagggtcatggtgtcatcactggagtttgaggaagacaccaagcttcactcc
gcagggcacttctcctccaattccaacaacaacaagagcccttcctcctcctcgtcctgc
tccttcacctcctcctccctcttccccttcccccccgccccagagggagaccccctcttc
aagctgcggcagagcccctctctgttcgacgacacggacagcgactgcaccatcgactcc
ctgggggccgcctcctgctactcggagcctgtctattcgtcctctgggacgccactccac
catcaccaccagcaccagcatcaccaccagcaccgcaaacagccgctcaagaagatcatg
aagaagacgctgagctatgagctgacggcggcgcaggacggtggcggtggccatgttgac
accagccacctgcatggctacacgggggtgtacatcaaggggctggaggtggccaacaac
gtgtcggtggagaagaagctgcagaggcctgacgtggtgagcccggcactgggacgcagc
cgcagtatgtcctcccccaccagacactcagagggagacggaaagaagcatagcagtaaa
gtgcagcacatcatggatgagatgatctccacggagagggagtatgtgcgttccctcagc
tacgtcatcgagcactacttcccagagatggagcgtctggacctgcctcaggacctctgg
gggaaacgcagcatcatctttggcaacatggagaaactgtgtaacttccactgccagtac
ttcctgaaagagctggaggcctctgcccactctcccctgtccatcagcagctgcttcctc
agacacgaggatcagtttggaatgtatgctctctacagcaagaacaagccgcagtctgac
gctctactcaccagccacgggaacggattctttaagaacaagcagttggagctgggtgat
aagatggacctggcgtcctacctgttaaagcccatccagaggatgtctaagtacgccctg
ctgctgaaggacctgatcaaggagtgtggtcattcccaggaacaggagctctctgacctc
cgcaccgcagaggagatggtcaagttccagctgcgccacggcaacgacctgctggccatg
gacgccatccggggatgtgatgtgaacctgaaggaacagggtcaactgaggtgtcaggat
gagttcatcgtgtggtgcggccgcaggaagtacctccgtcacgtcttcctgttcgaggac
ctcatcctcttcagcaaaaccaaaaagatagagggaggatacgacctctacatctacaag
cagtcctacaagacggcagagataggaatgacagagagcgtgggcgacagtgggctgcgt
ttcgagatctggttccggaggaggaagtcccaggacacgttcatcctacaggccagctct
ggagaggtcaaggctgtgtggactgccatcatcggaaagatcctctggaggcaggcgcta
cggaacagggaggtgcgcttgaaagagatggtttccatggggattggcagcaagcctttc
atggacatcaagcctagtgatgctgccattagtgaccgagccattgactacataatgaag
gggtcagagtcgaggaccagggcatccatcgcggtgtcctccttcgaccactccacaccc
tttaagcggcctcactccaccatctccaacagtagcacctcctcttcctcctcccagtcc
tcctcctcactgctgggctccctcaacctgcacctgtacccctcgcctgcccaccagcac
ccccacgccctgggcagcgtaccctccttcagccactggccctacgactgcattgaggag
gacgagctggagcaggacactggcagccagccttctatgatcacagagagctcgggggag
acatcgtcccagtgtatctccagtgacagtgtgacggggctgagcagcctcgccctcccc
atcccaggccacggccgccccaacatcatcatcagcaccttccccagcgactccacttcc
tccttcctgtgttcgtccacgcctctcggctcctcccaccctcagatggcccctccccca
gccccgttccctaaggaccaggacctccaagcccagggcagcatcttcatcacagcaagc
aagacctctcatattacaataggcctctctacagtggtctga
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