Coregonus clupeaformis (lake whitefish): 121542623
Help
Entry
121542623 CDS
T08357
Name
(RefSeq) protein Jumonji-like isoform X1
KO
K11478
protein Jumonji
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121542623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121542623
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
121542623
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
121542623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
121542623
NCBI-ProteinID:
XP_045082139
LinkDB
All DBs
Position
17:25388230..25491701
Genome browser
AA seq
1332 aa
AA seq
DB search
MSKDRPKRNIIQKKYDDSDGIPWLEEREVRKVLYLSLKEFKNTQRNKVTDGLGTGNINGS
FPHSHGCRSGPKAGLLAVNGKAECSRCSSQSNDGSSEYSGDDPVRKRPRLQAQRKFAQSQ
PSSPIATPVKLSETLLSPSPTSPLSDLTRRKPKTEDFLTFLCLRGSAALPGNMAYFGSAQ
DDVDLEDEDDEEEECDDRMSALSHNSTSCPSSQRKNKTTPGKKVSNGHVLNGHSRSLRGK
ELILRPRGREAVQARERAERGEARREHQRTSKGPPARTSGTTHSLRHSRPTQEHPKQVSK
VNRLSRVSSATVRNSCAKKPPASRTLPSRTVKSTAAALPRGHIPYTKARLLKEAKLTLGK
RASSKARQPMKNHRRPASGSARHHPHPRTPHSNSGKASSGDAKTPNKQEVQSNKAAGGCC
LQRVNGQLHPRRCGGQQVLQGREGVRHSKRRLGLPAEECPKETPESSTEVKKVRLQVNAP
ETRSSRKVNVQEKAVAVSGGHLGKVTSSRPSSSERRPKRASAGKLMLTRQAQPISPIANT
TTTTTTTATTPPADNTTSKKTFQATSKNTSQGSSKGTSTSTFSTSAAKVKPGTSSPAKAA
AEPKAAERQRGERGSGEKRGAARPPPLSLTEVPVFRPSLEEFQDPLVYVEAVRVQAESYG
LCMVAPPQDWRPECKLKEDMRFVTQVQHIHKLGRRWGSNVLRLACIRKHLQAQGISMEDP
PLIGGCELDLARFFQLINDMGGMQQVSDMKKWSKLADQLRIPKTAQDRLAKLQEAYCQYL
LSYDSLDPAERSRLEREVLEEKGRLEKRRGPLEGHPDDSQQSLLQLPRCEPKNGLVNGVV
QRNGLPRSLEEGEKEVKKQEEMWLRSRRRLFAQEKKGGAEEEKAEEEEGVLSDQHKCIYR
GKSVSLTTFYRTARNTMNMCFNKEPGTAEVEQEYWNIVEQRECHVAVHCGKVDTKTHGSG
FPVGKSEPFSKHGWNLTVLPNNSGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDHHRLP
YIDYLHTGADCIWYCIPAEEKMKLDKVVHTLLQANGTPGLEMLEKNIMISPEVLCRAGVK
VHRTVQQSGQFVVCFPGAFVSKVCCGYSVSETVHFATPQWLNTGYQAAKELKCRHIERSF
SMEKLLYQIAMSESKRENGLILRTMTSLLKDLRDTELRQRRDLFDAGLRSVARYCSHDNQ
ASSESRRIQRQWLRLDPSDRRCQVCQHLCYLSMVVQESENVVFCLECVLLYVQKHKSCRG
LKMMYRYDEDQINHLVSRVCGRVQERRGTRGLQGPGETAPPAKRSPRNRTSITVSLTRLP
SSTLPKTALGSK
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagacagacccaaaaggaacatcatacagaagaaatacgacgacagcgatggg
atcccatggttagaggagcgcgaggtgaggaaggtgctttacctttccctgaaggagttt
aagaacacccagaggaacaaggtgacagatggcctcggcacaggaaatatcaatggctct
ttcccacacagccatggctgccgatcaggaccaaaggcagggctactggcagtcaacggt
aaagctgagtgctcacgctgctcgtctcaaagcaatgatggcagcagcgagtattcaggg
gacgatccagtcagaaagagaccgcggctgcaggctcagaggaagtttgcccagtctcag
cccagctcccccattgccacaccagtcaagctgtctgagaccctcctgtcccccagcccc
acctcccccctcagcgacctcaccagacgcaagcccaagaccgaggacttcctcaccttc
ctctgtttacgaggctcggctgcgttgccaggcaacatggcgtactttgggagtgcccag
gatgatgtggatctggaggatgaagatgatgaggaggaggagtgtgacgacaggatgtca
gctctcagccacaactccacttcctgtccgtcctcacagcggaaaaacaaaacaacgccg
gggaagaaggtttccaatggacatgtgttgaatggccacagcaggtccttacgggggaag
gagctcatcctgaggcccagagggagagaggctgtccaggccagagagagggctgagcgg
ggagaggcccggagggagcaccagaggacctctaaaggacccccagccaggacctccggc
accacccacagccttcgccacagcaggcccacccaggagcacccaaagcaggtttcaaaa
gtgaacaggctgtcgcgggtatcgtcagctactgtacgcaactcctgtgccaaaaagccc
ccggcctcccgaacactgccgtccagaactgtgaagtccacagccgcagcgcttcccagg
ggccacatcccctacaccaaagccagacttctcaaagaggccaaactcacactgggcaaa
agagcctcctccaaagctcgccaacccatgaagaaccaccgccgccctgccagtggcagt
gcccgccaccaccctcaccctcgcacaccacactccaactcaggaaaagcctcaagcggc
gatgcaaagactcccaacaaacaggaggtacaatccaacaaggcagccggcgggtgttgc
ctacagcgagtcaacgggcagcttcacccacgccgatgtggcggtcagcaggtactgcag
gggcgtgagggcgtcagacactccaagagacgtctggggctcccggctgaggagtgtccg
aaagagacaccggagtcttcaacggaggtcaaaaaggtcagactgcaggtcaacgccccg
gagacacgaagcagcaggaaggtcaacgtccaggagaaggctgtggcggtgtcaggcggc
catcttggtaaggtcacgtcatcccgaccttcctcctcggagcgaagaccgaaacgagcc
tccgctggcaagctgatgttgacccgacaggcacagcccatatcccctattgctaatact
actactactactactactactgctactacaccaccagctgataacactacttctaagaaa
actttccaggccacttccaagaacacttcccagggatcttccaagggcacttccacctcc
actttctctacctcagcagccaaggtcaaaccaggcaccagcagcccagctaaagcagca
gcagagcctaaagcagcagagaggcagcggggagagcgggggagtggggagaagagaggt
gcagcacgacccccgcccctgtccctaaccgaggtgccagtattcagacccagcctggag
gagttccaggaccccctggtgtacgtagaggcggtgcgggtgcaggcagagagctatggg
ctgtgcatggtggcgccccctcaggactggaggccagagtgcaagctgaaggaggacatg
aggtttgtgacccaggtgcagcacatccataagctgggtcggcgctgggggtccaacgta
ctcaggctggcctgcatcaggaaacacctccaggcccagggtatctccatggaagacccc
ccgctcataggcggctgtgagttggacctggcccggttctttcagctcatcaacgacatg
ggcggcatgcagcaggtcagcgacatgaagaaatggagtaagctagccgaccagctccgt
atccccaagactgcacaggatcgtctggccaagctgcaggaggcctactgccagtaccta
ctgtcctacgactccctggaccccgctgagcgctcccgcctggaaagggaggtgctggag
gagaaggggaggctggagaagaggagggggcccctggagggccacccagatgactcccaa
cagagcctgctccagttgccccgctgtgagcccaagaatggcctggtaaacggggtggtg
cagaggaacggcctgcccaggagcctggaggaaggagagaaagaggtgaagaaacaggag
gagatgtggctgaggtccaggaggaggctgttcgctcaggagaagaaaggaggagcggag
gaggagaaagcagaagaggaggaaggggttctcagcgaccagcacaagtgtatatacagg
gggaagtcggtttctctcactacgttctacaggactgccaggaatactatgaacatgtgc
ttcaacaaggagcctgggacggctgaggtggagcaggagtactggaacattgtggagcag
agggaatgtcacgttgcagtgcactgtgggaaagtggacactaaaactcatgggagtggc
ttccctgttggaaagtcagagccgttttcgaaacatggatggaaccttacagtccttccc
aataattcaggatccattttacgccatcttggtgctgtgccaggtgtgaccattccgtgg
ctgaacatcggcatggtcttctctacctcatgctggtcgcgagaccatcatcgccttcca
tacattgattacttacacactggtgctgactgcatttggtactgtattcctgctgaggag
aagatgaagctggacaaggtggttcacacactactgcaggctaatggaaccccaggactg
gagatgttggagaagaacatcatgatctctccggaggtgctgtgtcgagcgggggtcaaa
gtgcaccggaccgtccagcagagtggccagttcgtcgtctgtttcccgggagcgttcgtc
tccaaggtgtgctgcggctacagcgtctccgagacagtgcacttcgccaccccccagtgg
ctgaacacgggataccaggctgccaaggagctgaaatgtcgacacatagagaggtccttc
tccatggagaagttgctgtatcagatcgcaatgtcagaatctaaacgggagaatggtctc
attctgaggaccatgacctcacttctcaaagacctcagggatacagagttgagacagcgc
agggatctgtttgacgccgggctgcggtccgttgcccgctactgtagccatgacaaccag
gcctcatcggagagtaggaggatccagcgccagtggctgaggctcgacccctcggaccga
cgctgccaggtgtgccaacacctctgctacctctccatggtggtccaggagagtgagaac
gtggtgttctgtctggagtgtgtcctgctgtacgtacagaaacacaagtcctgccgaggc
ctcaaaatgatgtaccgttacgacgaggaccaaatcaaccatctggtgagcagggtgtgt
gggagagtgcaggagaggagagggacgagaggactccagggccccggtgagacggcaccc
ccggccaaacgcagcccccgaaacagaacctccatcacagtgtctctcacccgcctcccc
tcctccaccctgcccaagaccgccctcggctctaaataa
DBGET
integrated database retrieval system