Coregonus clupeaformis (lake whitefish): 121542659
Help
Entry
121542659 CDS
T08357
Name
(RefSeq) cadherin-17-like
KO
K06811
cadherin 17, LI cadherin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121542659
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Major cadherins
121542659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Cadherin_CELSR2_9th
Fibulin_C
RET_CLD1
RibLong
Motif
Other DBs
NCBI-GeneID:
121542659
NCBI-ProteinID:
XP_041708069
LinkDB
All DBs
Position
28:7439208..7462109
Genome browser
AA seq
865 aa
AA seq
DB search
MAHPTMHLLLLSLLIGTAAGKGLEKGPLENKVLDVPEGTPVPYALYQFQASHLEVDGFRL
TGETEGKISISEDGWLYLEQALDWAHTQTHTLELEALVGSEPVEGPVSITINVLDVNNHA
PSFNQTDYIGIVKERTPAGVPFARVFATDLDDPESPNAHLSYTLVSQIPNRDNTLFFQIN
SNTGDISTTAEGERLLKAREGVVHSRGGDFRDSLKKKFDEYCTPTDDIPYELNPFYSCVQ
RAESRRLNPLEDPDFTLIVRVEDMGGESLNALNGNARVNIAVQENLWVNPGPINLREQLK
GIYPMPIGKVQSNDPSALYRLVQKERELTFPFNVTEEGDILLTEELDREDKAMYILVVFA
EDSHGNEVDPPLEVQVVVDDVNDNPPICEEELSVFEVQENEPTGSPIGDLMVHDADDINT
PNALLSYSLVSQTPSSVFTIDGISGRIQAKQMLQRRDATEYHLTVRVNDPGFSTECKVLI
KVIDINNELPIFEMNDYGSHNLSEDTAVGHTLLTVKATDADDPGTGSSRIEFHITAGNKD
GVFAMETDDNGEGRLVVAKPLNYEAASSYMLQIDARNPEPLVKGLEYGAESSAVVSLAIS
DVDEAPVFAMDILDVAVPEDTKAGATLLKINAKDPEGKEILFKMEGDTKGWLEIDPATGE
IKIKNKAVLDRETVEAFHFTVVAFEKANPELSSEREVSVRLLDVNDNVPKLTENQAFICV
KKPQPIVLTALDADADPFGAPFTFSLAQGKKSPNWDLSTVDGTSAKLTLKKSPSEDKTFL
IPINIKDNAGMGITQKFEVRVCNCTELGYCFTKPDVHAGVLGMPTTVGILAGTVGFIALV
LVIAFHRIKKDNQKKALQGETDAIL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcacatcccacaatgcacctgctgctgctcagcctcctcatcggcacagctgctggg
aaaggcctggagaagggaccactggagaacaaggttctagacgtaccagagggaacacct
gtaccctacgccctctaccagttccaagcatcccaccttgaggttgatgggttcagattg
acaggagagactgaaggaaagatcagcatctcagaggacggctggctctacctggaacag
gccctggactgggctcacacacagacacacactctagagctggaggccttagtgggttca
gaaccagtagaaggtccagtcagcatcaccatcaacgtattggacgtcaacaaccatgcc
ccctccttcaaccagactgactacatcggcatcgtcaaggaacgtacccccgcaggtgtt
ccatttgcgcgtgtgtttgctactgacctggacgacccagagtctcccaacgcccatctg
agttacaccctggtctcccagatccccaacagagacaacacactgttcttccagatcaac
agcaacacaggagatatttctactactgccgagggagagcgtctgctgaaggccagggaa
ggtgttgttcattccagaggaggggactttagggattctctgaagaagaagtttgatgag
tactgcacccccacagatgacatcccttatgaactcaaccccttctacagctgtgtacag
agagcagagtctcggaggctgaaccctctggaagacccagacttcacactgattgtgcgt
gtggaggacatgggcggggagtcgttgaatgctctcaacggtaacgcaagggttaacatt
gctgtgcaggagaacctgtgggtcaatcctggaccaatcaacctcagagaacagttgaaa
gggatataccccatgcccatcggcaaggtccagtctaatgatcccagtgccctctacagg
ctggtacagaaagagcgggagctgacgttccccttcaatgtcacggaggaaggagacatt
ctgctgactgaggagctggacagagaggacaaggccatgtacatcctggtggtgtttgct
gaggatagccatggtaacgaggtagaccctcccctggaggtgcaggtggtggtggacgat
gtgaatgataaccctccaatctgtgaggaggaactcagtgtgtttgaagtgcaggagaac
gaacccacaggcagtccaattggagatctgatggtgcatgacgctgatgacatcaacaca
cccaacgcactgctctcctattcactggtgtcccaaaccccttcatccgtctttaccatc
gatggcatcagcggccgcatccaggccaagcagatgctccaacgcagagacgcaacagag
taccacctcactgtcagagtaaacgacccaggtttcagcacagaatgtaaggtcctcatc
aaggtcatcgacatcaacaatgagctccccatcttcgagatgaatgactatggtagtcac
aacctgtctgaagacacagctgtaggccacaccctcctgacggtaaaagccacagacgct
gacgaccctggaacaggaagctcccgcatcgagttccacataaccgcgggcaacaaagat
ggagttttcgccatggagacagacgacaatggggagggcaggcttgttgttgccaagcct
ctgaactatgaggctgcttcttcctatatgctacagattgatgctcgtaacccagaaccc
ctggtgaagggtctggagtacggcgctgagtcctccgccgtcgtctcgttggcgatcagt
gacgttgatgaggctccagtgtttgccatggacattctggatgtcgcggtgccagaggac
actaaggcgggagctacgctgctcaaaataaacgccaaggacccagagggcaaagagata
ctgttcaagatggagggagacactaagggttggttggagattgatcctgctactggagag
ataaagataaagaataaagccgtgctggacagagagacggtggaggccttccactttact
gttgtcgccttcgagaaagccaatccagagctgtcctcagagcgcgaggtgtctgtgagg
ctgctggatgtgaatgacaatgtccccaagctgacagagaaccaggctttcatctgtgtg
aagaagccccagcctattgtcctgacggccctggacgcagacgcagaccccttcggagca
cctttcacattcagcctggcccagggcaagaagtcccccaactgggacctaagcactgtg
gatggtacatctgctaaactgaccctgaagaaatctcccagcgaggacaaaacattccta
atccccatcaacatcaaagacaacgctggcatgggcatcacacagaagtttgaggtgcga
gtgtgtaactgtacagagctgggatactgtttcaccaagccggacgttcatgcaggcgtg
ttaggaatgcccaccaccgtcggaatcctggctggaactgtcggattcatcgccctcgtc
ctggtcatcgctttccaccgtataaagaaggacaaccagaagaaagccttgcagggagaa
acggatgccattctctag
DBGET
integrated database retrieval system