Coregonus clupeaformis (lake whitefish): 121542663
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Entry
121542663 CDS
T08357
Name
(RefSeq) epithelial splicing regulatory protein 1 isoform X1
KO
K14947
epithelial splicing regulatory protein 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121542663
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121542663
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_1
Motif
Other DBs
NCBI-GeneID:
121542663
NCBI-ProteinID:
XP_041708076
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Position
28:complement(7362974..7378598)
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AA seq
736 aa
AA seq
DB search
MTAQVDYLAVLFTTTSGASGDLLGSDEKDLVQLVWQLVDLNNKKLGKVNEVLIRPEHSDL
AEDCLGEREEEDEVEDSEESVSTVTGLEHALNQFHLRLTNEVNTLGTGTSVCVCTDGQLH
IRQVLHPEAAGKNLALPECFNSFFDLRKEFRKHFPSADTKSLEVQYMAESLSVTVEPVAM
LDPTAMLAPVTAALQVQTMANIVLALLSEPLRHTFSNPERVTEKFESGTCSKMERVCDNT
VIRARGLPWQSSDQDIARFFRGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDMALQR
HKHHMGNRYIEVYKATGEDFLKIAGGTSSEVALFLSREDQVIVRMRGLPFTATPDQVLAF
FSQGEGPKEVCPVSGDKDGILFVRFPDGRPTGDAFVLFASEEHAQCALRKHKDILGKRYI
ELFKSTAAEVQQVLNRYSSAPLIPVAPAPLVSVLPSVSLLPSPGGVRDCLRLRGLPYTAT
IEDILAFLGEYTHDIRPHGVHMVVNQQGRPSGDCFIQMHSAERAFSASQRVHKQVMSGPG
QAGKRGLNSRYVEVFPCSAEEMGLVLMGGSLSHTHTHTHTRTRSGTGLSPPPCKSRRLSP
PSYSFPPAPSILPAEAAGLFPPIGQVLLSPRPLGPGHAYYPASTQLYMNYTAYYPSPPGS
PNTIGYYPSPSPRGVVRMHGLAYKELLNTIQGYQSPMEALPVLSGMIGQSSSGDALMPFP
PLLTKQGGHYLDRNML
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgacggctcaggtagactacctggcggtgttgttcaccaccacatctggcgcgagcgga
gacctcttgggttcggacgagaaggatctcgtgcagttggtgtggcagctcgtggatttg
aataacaaaaagttggggaaagtgaatgaggtgttaatacggcctgagcactccgacctg
gcagaagattgtctgggcgagagagaggaggaggatgaagtggaggacagcgaggagtct
gtctctacagtcacaggcttggagcacgcgctaaaccagttccatctgagattgaccaat
gaagtgaacaccttgggcacgggcacgtcagtgtgtgtgtgtacggacgggcagctccac
attcgccaggttctccaccccgaagctgcgggcaagaacctggcactgccagaatgtttc
aactccttttttgacctgaggaaagagttcaggaagcacttcccctctgcagacaccaag
agcctggaggtgcagtacatggctgaatctctcagtgtaactgtggagccagtagccatg
ttggatccgacggccatgttggcaccggtcacagcagcactgcaggtccagaccatggcc
aacatcgtcctagccctgctatctgaacccttacgtcacacattctcaaacccagagaga
gtcactgagaagtttgaaagcggcacttgcagtaagatggagcgtgtgtgtgataacacg
gtgatcagagcgagggggttgccttggcagtcatctgaccaggacatcgctcgcttcttc
agaggactcaacattgccaagggtggcgctgcgttgtgtctgaacgcccagggtcggagg
aacggagaggctctggtccgctttgtcagtgaggaacacagagacatggccctgcagaga
cacaaacaccacatgggcaacagatacatagaggtgtacaaggcaacaggagaggacttc
cttaagatagcaggcggtacctccagtgaggtggcgttgttcctgtctcgtgaggaccag
gtgatcgtcaggatgcgaggtcttcccttcaccgccacacctgaccaggtgctggccttc
ttctcccagggggaggggcctaaagaggtgtgtcctgtcagtggtgacaaggatggcatc
ctatttgtgcgtttccctgatggaaggccgactggcgacgccttcgtcctattcgccagt
gaggagcatgctcagtgcgctctcaggaagcacaaagacatcctggggaagagatacatt
gagctattcaagagcaccgccgctgaggtgcaacaggtgttgaacaggtactcgtcagcc
cctctgatccccgtggctcctgcccccctggtgtcagtgttgccctccgtgtctctgttg
ccctctcctggtggtgtgagggactgcctcaggctgagggggctgccctacaccgccacc
atagaggatatactggccttcctaggagaatacacacatgacatcagaccacacggagta
cacatggtggtcaaccaacaaggtcgtccgtcaggggactgtttcatccagatgcattca
gcggagcgggctttctctgcctcccagcgggtccacaagcaggtgatgtctggtccgggc
caggctggcaagcgagggcttaacagtcgctatgtggaggtgttcccctgtagcgctgaa
gagatgggtctggtgttgatgggaggctccctctcacacacacacactcacacacacacc
cggaccaggagtgggacagggctcagcccgccgccatgtaagtccagacgtctgtctcct
ccctcctactccttcccacccgccccttccatcctgcctgctgaggctgccggcctattc
cctcccattggtcaggtgctgctgagtccccgccccctaggacctggacacgcttactac
ccagctagcactcagctctacatgaactacactgcatactatcccagtcccccaggttct
cccaacactatagggtactacccctccccctcccctaggggagtggtccgtatgcatggg
ctcgcctacaaagaactgctcaacaccattcagggataccagagtcctatggaggcattg
cctgtcctgagcggtatgattggtcagtccagcagtggtgatgctctgatgccctttccc
cctcttctgaccaagcagggagggcactacctggaccgaaacatgctgtag
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