Coregonus clupeaformis (lake whitefish): 121542689
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Entry
121542689 CDS
T08357
Name
(RefSeq) nibrin
KO
K10867
nibrin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03440
Homologous recombination
cclu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121542689
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
121542689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cclu03032
]
121542689
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121542689
DNA replication proteins [BR:
cclu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
121542689
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
121542689
BRCA1-C complex
121542689
BRITE hierarchy
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
Yop-YscD_cpl
RTT107_BRCT_5
BRCT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
121542689
NCBI-ProteinID:
XP_041708112
LinkDB
All DBs
Position
28
AA seq
867 aa
AA seq
DB search
MWTLKPLESGAITHYLLPGKEYVVGRKNCEVILPNDQSISRAHAHLTATDQTLTLKDCSK
YGTFVNDERLSGDTPRSLTAGDRVTFGVFHSKFSVQQVTVVVCSSCVDNEGKVSLSQALQ
PLGGRLANTWTQDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFTELTKALQQKQPPPKA
ESFFPEIDEPSLNKDEVDLTERPERKELFTDKTFLFLNAKQQKRLSLAVNCGGGRSQLLE
EGSVPVSLLESPLSCVISMATGNSQALVPPSTKKWADSVGRILQRKGLRFITESEIGLAA
IYVSCDKYCNPSNQMADSESMRMKPTIPGATLSQNAPVDETVLPAASQNITAYAVNTEPS
QGISGVDVAGVSAVGETPERDQSRTTSRLDRPKRSSGRELAGTCTVAETMMSSFSASDSA
GGGGSDRKKGELQHPGGGKGDAITRFLATAPRTIGGVQTISQQKRSSQKQQVSQKGSPQK
QSALTSFFQPVGKKRPREGEESSTVQSEAKLSRREEEEGEKRKRTVPQHTETSNTTHTRA
PSNTTTHTPSAMTHTRATTHTPTGRSQGQQSSGAGQTEALSGGVSHPAQQGLQSRKRKEM
EEETKGGGASEIEMDELESIMSEDMDESDEPMSASQGQRSKLTEQSSTNQGQRSQLTDKS
SINRKQLLKTVELTSANKKQRVDPVEPITAYHRSSLDSEEGSSANTRQRAEPVAEVKEEE
VSFIEAKPVSGVAPGHLEKPETDTKPSKPAKQNASGSGGENLPSRLLVVEFKSLTVATLA
RPKPRPTETHSNVNMKDFKRFRKVPVPGAQGLPNIIGGSDLLAHNRGKNSELEEWLRDAA
EDERQSKKEETLGDDLFRYNPKPTKKR
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgtggacactgaaacctttagaatccggagctatcacccactacctcctgccaggtaag
gagtatgtggtggggcgtaagaactgtgaggtcatcctgcccaatgaccagtccatcagc
cgggctcatgctcaccttaccgctacagaccagaccctgaccctgaaggactgctctaag
tatgggacgtttgttaacgacgagcgtctgtcaggtgacacccctcgcagcctaacggca
ggggacagagtgacatttggggtcttccacagcaagttcagtgtgcagcaggtaacggtg
gtggtgtgttcgtcctgtgtggataatgaagggaaggtctctctgtctcaggccctgcag
cctctgggtggccgactggccaacacctggacacaggactgcactcacctggtcatgccc
actgttaaagtcaccatcaagactatctgtgcgttgctgtgctgtcggcccatagtcaag
caggagtttttcactgagctcaccaaagccctgcaacagaaacaaccacctccaaaagct
gagagtttcttcccagagatagatgagcccagtctgaataaggatgaggtggacctgaca
gagaggccagaacgtaaagaacttttcactgacaagaccttcctcttcctcaatgccaaa
cagcaaaagcgtctgagtttggcagtgaattgcggaggtgggaggagccagctcctggag
gaggggtctgtccctgtgtcactcctggagtcgccattgagctgtgtgatcagcatggca
acgggaaactcccaagcactagtgcccccctccactaagaagtgggcagactctgtgggg
aggattctacagaggaaaggtcttcgattcatcacagagtctgagatcggattggctgcc
atctatgtcagctgtgacaagtactgtaatccctccaatcagatggctgactcagaatcc
atgagaatgaaacccaccatccccggtgccacactatcccagaatgcaccagtggatgag
acggtgctgccagcggcgtctcagaacatcacagcctatgctgtaaacaccgagccctca
cagggcatcagtggggtggatgtggctggggtgagtgcagttggagagacccctgagagg
gaccagagccggacaacctctcgtcttgaccgacccaaacgctcctcaggcagagagctg
gccgggacctgcacagtggcagagactatgatgtcatcattcagcgcctcagacagcgct
ggtggtggcggctcagacagaaaaaaaggagagctacaacacccaggtggagggaaaggt
gatgctatcaccagattcctagccactgcccctcggaccatcgggggagtgcagacgata
tcccaacaaaagcgctcctcccagaaacaacaggtctcgcagaaaggttccccccagaaa
cagtctgccctcacaagtttcttccagcctgtcggcaagaaaagacctcgggaaggagag
gagtcctctactgtccaatcagaggccaagctctccaggagggaagaggaggagggggag
aagaggaagaggacagtaccacagcacacggagacctccaacaccacacacacacgtgct
ccctcaaacaccaccacacacactccttctgccatgacacacacacgggctaccacacac
acccccacaggcaggtcccagggccaacagagctcaggagcaggtcagactgaggctctg
tcagggggggtctcccaccctgcccagcaggggctccaatccaggaagaggaaagagatg
gaggaggagacgaaagggggtggggcttcagagatagagatggacgaactggagtccatc
atgtctgaggacatggatgaatcagatgagcccatgtcagccagtcaaggccagcggtcg
aagctgacggaacagagttcaaccaatcaaggccagaggtctcaactgacagacaagagc
tcaatcaatagaaaacagctcctaaagacagtggaacttacctctgccaataagaaacag
cgggttgatccagtggaaccaatcacagcctatcataggtcaagcttggattcagaagag
ggctcgtcagccaatacaagacagcgagcggagcctgtagctgaggtcaaagaggaagag
gtgtctttcattgaggcaaaaccagttagtggtgtggctcctggtcatctggaaaagccg
gagactgataccaaaccctccaaacctgccaaacagaacgcctcaggttcagggggtgag
aatctccccagtagacttctagtggtggagttcaaatccctcaccgtggcaacactggcc
agacctaaaccacgccccacggagacgcacagcaacgtcaacatgaaggacttcaaacgc
ttccgcaaggtcccagtgcccggtgcccagggtttgcccaacatcatcggagggtcagac
ctgttggcccacaaccggggcaagaactctgagctggaggagtggctgagagacgcagca
gaggatgagcgtcagagcaagaaagaggagactttgggagatgacctcttcagatacaac
cccaaacccaccaagaaaagatga
DBGET
integrated database retrieval system