KEGG   Coregonus clupeaformis (lake whitefish): 121542689
Entry
121542689         CDS       T08357                                 
Name
(RefSeq) nibrin
  KO
K10867  nibrin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03440  Homologous recombination
cclu04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    121542689
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    121542689
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cclu03032]
    121542689
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121542689
DNA replication proteins [BR:cclu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    121542689
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     121542689
    BRCA1-C complex
     121542689
Motif
Pfam: Nbs1_C NIBRIN_BRCT_II FHA Yop-YscD_cpl RTT107_BRCT_5 BRCT PTCB-BRCT
Other DBs
NCBI-GeneID: 121542689
NCBI-ProteinID: XP_041708112
LinkDB
Position
28
AA seq 867 aa
MWTLKPLESGAITHYLLPGKEYVVGRKNCEVILPNDQSISRAHAHLTATDQTLTLKDCSK
YGTFVNDERLSGDTPRSLTAGDRVTFGVFHSKFSVQQVTVVVCSSCVDNEGKVSLSQALQ
PLGGRLANTWTQDCTHLVMPTVKVTIKTICALLCCRPIVKQEFFTELTKALQQKQPPPKA
ESFFPEIDEPSLNKDEVDLTERPERKELFTDKTFLFLNAKQQKRLSLAVNCGGGRSQLLE
EGSVPVSLLESPLSCVISMATGNSQALVPPSTKKWADSVGRILQRKGLRFITESEIGLAA
IYVSCDKYCNPSNQMADSESMRMKPTIPGATLSQNAPVDETVLPAASQNITAYAVNTEPS
QGISGVDVAGVSAVGETPERDQSRTTSRLDRPKRSSGRELAGTCTVAETMMSSFSASDSA
GGGGSDRKKGELQHPGGGKGDAITRFLATAPRTIGGVQTISQQKRSSQKQQVSQKGSPQK
QSALTSFFQPVGKKRPREGEESSTVQSEAKLSRREEEEGEKRKRTVPQHTETSNTTHTRA
PSNTTTHTPSAMTHTRATTHTPTGRSQGQQSSGAGQTEALSGGVSHPAQQGLQSRKRKEM
EEETKGGGASEIEMDELESIMSEDMDESDEPMSASQGQRSKLTEQSSTNQGQRSQLTDKS
SINRKQLLKTVELTSANKKQRVDPVEPITAYHRSSLDSEEGSSANTRQRAEPVAEVKEEE
VSFIEAKPVSGVAPGHLEKPETDTKPSKPAKQNASGSGGENLPSRLLVVEFKSLTVATLA
RPKPRPTETHSNVNMKDFKRFRKVPVPGAQGLPNIIGGSDLLAHNRGKNSELEEWLRDAA
EDERQSKKEETLGDDLFRYNPKPTKKR
NT seq 2604 nt   +upstreamnt  +downstreamnt
atgtggacactgaaacctttagaatccggagctatcacccactacctcctgccaggtaag
gagtatgtggtggggcgtaagaactgtgaggtcatcctgcccaatgaccagtccatcagc
cgggctcatgctcaccttaccgctacagaccagaccctgaccctgaaggactgctctaag
tatgggacgtttgttaacgacgagcgtctgtcaggtgacacccctcgcagcctaacggca
ggggacagagtgacatttggggtcttccacagcaagttcagtgtgcagcaggtaacggtg
gtggtgtgttcgtcctgtgtggataatgaagggaaggtctctctgtctcaggccctgcag
cctctgggtggccgactggccaacacctggacacaggactgcactcacctggtcatgccc
actgttaaagtcaccatcaagactatctgtgcgttgctgtgctgtcggcccatagtcaag
caggagtttttcactgagctcaccaaagccctgcaacagaaacaaccacctccaaaagct
gagagtttcttcccagagatagatgagcccagtctgaataaggatgaggtggacctgaca
gagaggccagaacgtaaagaacttttcactgacaagaccttcctcttcctcaatgccaaa
cagcaaaagcgtctgagtttggcagtgaattgcggaggtgggaggagccagctcctggag
gaggggtctgtccctgtgtcactcctggagtcgccattgagctgtgtgatcagcatggca
acgggaaactcccaagcactagtgcccccctccactaagaagtgggcagactctgtgggg
aggattctacagaggaaaggtcttcgattcatcacagagtctgagatcggattggctgcc
atctatgtcagctgtgacaagtactgtaatccctccaatcagatggctgactcagaatcc
atgagaatgaaacccaccatccccggtgccacactatcccagaatgcaccagtggatgag
acggtgctgccagcggcgtctcagaacatcacagcctatgctgtaaacaccgagccctca
cagggcatcagtggggtggatgtggctggggtgagtgcagttggagagacccctgagagg
gaccagagccggacaacctctcgtcttgaccgacccaaacgctcctcaggcagagagctg
gccgggacctgcacagtggcagagactatgatgtcatcattcagcgcctcagacagcgct
ggtggtggcggctcagacagaaaaaaaggagagctacaacacccaggtggagggaaaggt
gatgctatcaccagattcctagccactgcccctcggaccatcgggggagtgcagacgata
tcccaacaaaagcgctcctcccagaaacaacaggtctcgcagaaaggttccccccagaaa
cagtctgccctcacaagtttcttccagcctgtcggcaagaaaagacctcgggaaggagag
gagtcctctactgtccaatcagaggccaagctctccaggagggaagaggaggagggggag
aagaggaagaggacagtaccacagcacacggagacctccaacaccacacacacacgtgct
ccctcaaacaccaccacacacactccttctgccatgacacacacacgggctaccacacac
acccccacaggcaggtcccagggccaacagagctcaggagcaggtcagactgaggctctg
tcagggggggtctcccaccctgcccagcaggggctccaatccaggaagaggaaagagatg
gaggaggagacgaaagggggtggggcttcagagatagagatggacgaactggagtccatc
atgtctgaggacatggatgaatcagatgagcccatgtcagccagtcaaggccagcggtcg
aagctgacggaacagagttcaaccaatcaaggccagaggtctcaactgacagacaagagc
tcaatcaatagaaaacagctcctaaagacagtggaacttacctctgccaataagaaacag
cgggttgatccagtggaaccaatcacagcctatcataggtcaagcttggattcagaagag
ggctcgtcagccaatacaagacagcgagcggagcctgtagctgaggtcaaagaggaagag
gtgtctttcattgaggcaaaaccagttagtggtgtggctcctggtcatctggaaaagccg
gagactgataccaaaccctccaaacctgccaaacagaacgcctcaggttcagggggtgag
aatctccccagtagacttctagtggtggagttcaaatccctcaccgtggcaacactggcc
agacctaaaccacgccccacggagacgcacagcaacgtcaacatgaaggacttcaaacgc
ttccgcaaggtcccagtgcccggtgcccagggtttgcccaacatcatcggagggtcagac
ctgttggcccacaaccggggcaagaactctgagctggaggagtggctgagagacgcagca
gaggatgagcgtcagagcaagaaagaggagactttgggagatgacctcttcagatacaac
cccaaacccaccaagaaaagatga

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