KEGG   Coregonus clupeaformis (lake whitefish): 121542711
Entry
121542711         CDS       T08357                                 
Name
(RefSeq) toll-like receptor 12
  KO
K18807  toll-like receptor 12
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:cclu04054]
    121542711
Pattern recognition receptors [BR:cclu04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   121542711
SSDB
Motif
Pfam: LRR_8 TIR LRR_4 TIR_2 LRR_9 DHU1_N
Other DBs
NCBI-GeneID: 121542711
NCBI-ProteinID: XP_041708147
LinkDB
Position
28:6109569..6118964
AA seq 982 aa
MTFVFWVWRPGVSVSVLLLLCVCDRVEGVIRRHCDCYEEDMYVQKDIGGVLDCSFKPGLG
PYAECTEITDLRSGLEEVFPDVRSLCIFHSASSLPADSFSHIPLLEHLWVDGSHLAKVTS
GAFAGLPKLRFLYLLFSSTWGGVNVTLDPGVFQGLSSLEELTLAGMSLALAPPALLDPLV
GVRRLRVDRAGVRDLGELFCLLSPGMEKLETLDLPNSKVSSIQNGGCSGSNPWPTALLSR
IRILDLSGNPVRRVEPKSLAVFQNLSSLSLSMVDVWVGQLWGSGMGRVNKLYLSSYNPRQ
FTPSLSDLCTLVVKHGVESLALHMALITAFTAEVMKRCGLGLRQLSVSSEDLSGMELGFW
TGTGQLQGLMMVLTKLTNASFCSAGGGRVWNLTSLILHDNHLTEITTDQFSCMPLLERLD
LSRNHISLLAHRALQGMPLLRVLDLTHNKISLLGEDDFEGLPALEVLLLEGNKISGGIAH
GVFRRQHRLQDLSLGEIDIIYELFLNMLFLGFPTKLQHLLIDTGPGTYLTVGHVPAPEVP
MVLELRGKMIQSSDCVNNMFPMVRELKVGEGTTFACTSLFLAPYFLNLESFEFSANPEKF
GTPYTTINQLRKLKRLKLTNLNFSNHTDPSVTFRNLTELRSLVLINCRLNFLTRSMFTDL
VSLRVLRLYSESPLILLEGVFLPLLSLSTLVFDQVDFRCDCSNGWLLDWADNSRKTQVVL
LQRQQCIWHYQRLNFLSTMDRLCQTEEDFLSYVSTMTAVCTLLFLALGYRFLRWPCVILF
FRLRGWVERRVGRRWWRKRRMGRGQWEELIEGEEGEEEQEEEEVRYDAFVSFSSRDEAWV
LGEMAPMLEEEGEPRLRLCLHHRDFEVGKGIVDNIAESIYSSRRTVCVLTRRYLRSDWCG
LEMRVATHRLLSEHSHRLILIFLEHISPFELSAFHRLAKLARTRTYLDWPQDEDERVTFW
ERLRRNIAERDTDELHDPPEAS
NT seq 2949 nt   +upstreamnt  +downstreamnt
atgacgtttgtgttttgggtgtggaggcccggtgtcagtgtgagtgtgctgctgctcctg
tgtgtgtgtgacagagtggagggggtgatcaggcgtcactgtgactgctatgaggaggat
atgtatgtacagaaagatatcggaggggtcctagactgttcctttaagcctggcctggga
ccctacgctgagtgcacagagatcactgacctcaggtctgggctggaggaggtgtttcct
gatgtgcgttctctttgtatctttcactccgcctcctccctgcctgcagactccttctct
cacattcccctcctggagcacctctgggtggatggctcacacctggctaaggtgacctca
ggggccttcgctggtctgcccaaactaaggttcctatacctcctcttctcctccacctgg
ggcggagtgaacgtcactctggatccaggggtgttccagggcctgtctagcctggaggag
ctcaccctggctgggatgagtctggccctggccccccctgctctgctggatcccctggta
ggggtgaggaggctgagggtggaccgggctggagtgagagacctgggggaactgttctgt
ctcctctcccctgggatggagaaactagagaccctggatctgcccaacagcaaggtcagc
tccatccagaacggaggctgctctggatccaatccgtggcccacggcgctcctgtccagg
atccggatcctggatctgagtggaaacccggtgcggagggtagagccgaagtctctggct
gtgttccagaacctgtccagtctgtccctgtctatggtggatgtctgggtgggccagctg
tgggggtctggcatggggagggttaacaagctctacctgtccagttacaacccgagacag
ttcacccccagcctgtctgacctgtgtacgctggtggtaaaacatggagtggaatcattg
gctctgcacatggccctgatcacagccttcactgcagaggtcatgaagaggtgtggtctt
ggtctgaggcagctgtctgtgagttctgaggatctgtctggtatggagctagggttctgg
actggtaccggtcagttacagggtctgatgatggtcctgaccaagctgaccaacgcctcg
ttctgctctgcagggggagggagggtgtggaacctcacctctctcattctccatgacaac
cacctcactgagatcaccactgatcagttctcctgcatgcccctgctggagcgcttggat
ctgagtaggaaccatatctccttgctggcccaccgggctctccagggtatgccgctcctc
cgcgtcctcgacctcacccacaacaaaatctccctgctaggagaagatgactttgagggc
ctgcctgctctagaggtgctcctcctggaagggaacaagatctcggggggcatcgctcat
ggggtgttccgtagacagcatcgactccaagacctcagcctgggagagatagacattatc
tacgagctcttcctcaacatgctgttcctgggcttccccaccaagctccagcacctcctc
atcgacacaggcccaggaacctacctcaccgtgggccatgttcccgctcctgaggtcccc
atggtcctggaactcagagggaagatgatccagtcctctgactgtgtcaacaacatgttc
cccatggtccgagagctgaaggtgggtgaggggacaacgtttgcctgcaccagccttttc
ctggccccctacttcctcaatctcgagtcgtttgagttctcagccaaccctgagaagttt
ggcaccccctacaccaccatcaaccagctacgaaaactgaagaggctcaaactgaccaac
ctcaacttctccaaccacacagaccccagtgtcaccttcaggaacctgactgagctcagg
agcctagtgctgatcaactgtcgactcaacttcctcaccaggtccatgtttacagacttg
gtgtctctacgtgtgttgaggctgtacagtgagagtcctctgatcctgttggagggggtc
ttcctccccctgctgtctctctccacgctggtctttgaccaggtcgacttccgctgtgac
tgctccaacggctggctgctggactgggccgacaactctcgtaaaacacaggtggtgctc
ctgcagcggcagcagtgcatctggcactaccaacgactcaacttcctgtccaccatggac
cgcctctgccagaccgaagaggacttcctgtcctacgtctccacaatgactgctgtgtgc
accctcctgttcttggcgctaggataccgctttctccgctggccctgtgtcattctattc
tttcgtctgagaggatgggtggagcggcgtgtggggaggaggtggtggaggaagaggagg
atggggagggggcagtgggaggagctgatagagggggaggagggagaggaggagcaggag
gaagaggaggtgaggtatgatgcgtttgtgtcattcagcagtcgtgacgaggcgtgggta
ctgggagagatggcccccatgttagaggaagagggggagccacgactacgactgtgtctg
caccaccgagactttgaggtagggaaaggcatcgtggataacatcgctgagagcatctac
agcagcaggaggacggtgtgtgtgttgaccagacgctacctgaggagtgactggtgtggc
ctggagatgagagtggctacacaccgcctgttgtctgagcacagccacagactcatcctc
atcttcctagaacacatctcccccttcgagctgtccgcctttcacaggctggctaagctg
gccagaacccggacctacctggactggccccaggatgaggacgagagggtaacgttctgg
gagcgtttacgacgaaacatcgcagagagagacacagacgaactgcatgatcctccggaa
gcatcctga

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