Coregonus clupeaformis (lake whitefish): 121542715
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Entry
121542715 CDS
T08357
Name
(RefSeq) SHC-transforming protein 1-like isoform X1
KO
K06279
SHC-transforming protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04012
ErbB signaling pathway
cclu04510
Focal adhesion
cclu04910
Insulin signaling pathway
cclu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
121542715
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121542715
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
121542715
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121542715
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Gene cluster
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Motif
Pfam:
PID
SH2
PGM_PMM_IV
DUF7063
Delta_lysin
DUF7461
Motif
Other DBs
NCBI-GeneID:
121542715
NCBI-ProteinID:
XP_041708153
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Position
28:6056360..6080634
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AA seq
590 aa
AA seq
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MMELVPKTKYTHFRSESLSSNDDTNSNPSSLPPSTPATPLTPPGLPSSLSSSSLTPILPP
SSRHRAENSPTTLCSFFPRMGALRLGVSATLLPGLKASSRPQQAQAPMESSGVNSSRSPP
PHPPHCLTAPSPPPRPPLQDMNRLGGPSRRARVEGGQLGGDEWTRHGSFVNKPTRGWLHS
DHVVSTTGVAYSVRYMGCVEVLQSMRALDFNTRTQVTREAISVVCEAVPGAKAAQRKRKP
SSRCMTSILGKRNLQFAGMTISLTVSTISLNLLASDCKQIIANHHMHSISFASGGDPDTA
EYVAYVAKDPVNQRACHILECSEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAP
FDSSAWEEEEDEGAPPPAEVPYYNNFPGKQPPPGGLVDMRGRPGATLPYGQPGQNDIHKQ
PLPPLPMGAKEGGRDLCDDPSYVNVDKPRPPAAAANGNAHRDAFDMKPFDDSLGVSGLGV
SAAPPLVEQLQCEAWFHGSLSRRQAERLLTRDGDFLVRESGTTPGQYVLTGQQGGQPKHL
LLVDPEGVVRTKDHHFESVSHLISYHMDNRLPIVSAGSEVCLQQPVEHRA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctggtccctaaaactaagtacactcacttccggagtgaatctctcagttcg
aatgacgataccaactccaacccctcctcgctccccccttccacccccgcaacccccctc
accccccctgggctaccctcctccctgtcctcctcctctctcacccccatcctcccccct
tcctcccgccaccgagccgagaacagccccaccacgctctgctccttcttccccaggatg
ggagcccttcgcctgggcgtctctgccactttactcccaggcctcaaggcctccagcagg
cctcagcaggctcaagcccccatggagtcttcaggggttaacagttccagatctccccct
cctcacccccctcactgtctaacagccccttctcccccccctcgcccccctttgcaggat
atgaaccggctgggcgggccgtccaggagggcgcgggtggagggggggcagttgggggga
gatgagtggacgcgccacggctccttcgtcaacaagcccaccagaggatggctacactca
gaccacgtggtcagcaccactggggttgcctactctgtacggtatatgggctgtgtggag
gtgctacagtctatgagggcgctggacttcaacaccagaactcaggtcaccagagaggct
atctcagtggtgtgtgaggcagtgcccggagccaaagcagcccaacgcaagagaaagccg
tcgtctcgctgtatgacgtccattctggggaaaagaaacctgcagtttgctgggatgacc
atcagcctgacggtctctaccataagcctcaacctgctggcctctgactgcaaacagata
atcgccaatcatcacatgcactccatctctttcgcttctggaggagacccagacacagca
gagtatgtagcatacgtggccaaagacccagtcaaccagagagcgtgtcatatcctggag
tgttcagagggcttggcccaggatgtaatcagtacgataggacaggccttcgaactacgc
ttcaaacagtacctgaagaacccccccaaactggtcaccccccatgacaggatggctccg
tttgacagctcagcgtgggaggaagaggaagatgagggagcaccgccccctgcagaggtt
ccgtactataataacttccccgggaaacaacctcctcctggaggactggtggacatgagg
ggccgccccggggctaccctgccctatggacagccgggtcagaatgatattcacaagcag
ccgctgccccctctaccaatgggagcaaaggagggaggacgggacctgtgtgatgaccct
tcatacgtcaatgtggataaaccccgcccaccagcagctgcagccaatggcaatgctcac
agagatgcgttcgatatgaagccgtttgatgattccctgggtgtatcaggtctgggggtc
tcagcagcaccccctctggtggaacagctgcagtgcgaggcctggttccacggcagcctg
agtcgcaggcaggctgagagactgctgacccgcgacggagacttcctggtccgagagtca
ggcaccacgcctggacagtacgtcctcactggacaacaggggggtcagcccaaacaccta
ctactggtcgacccagagggagtggtacgtaccaaagaccaccactttgagagtgtgagc
cacctgatcagttaccacatggacaacagactgcccatagtatcagcaggcagtgaggtg
tgtctgcaacaaccagtggagcacagggcctga
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