Coregonus clupeaformis (lake whitefish): 121542730
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Entry
121542730 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: small conductance calcium-activated potassium channel protein 2
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121542730
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121542730
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF6775
DUF7310
Motif
Other DBs
NCBI-GeneID:
121542730
NCBI-ProteinID:
XP_041708173
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All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MEPPPSLSLTLLGSSEDEDPRFPLPLSGISHSSMTGNYPGSNHSNHRGGSSLDRLNGSPT
TPNMPQASLPKLPLSSVGGQPLPPLPNALHPTSTPLSSCLGSQHSLSGDNSPVYNTLFYS
SHSPSMERERDRDRERGCKHRQPSPLVHRRDSNPFTEIAMSSCKYTGGVMKPLSRLSASD
VTSSNQTAAATPKSVGQHLLPAQLPLEGGTETERLHPLPILAIVQSTDPESSRDRDXSSK
EDSPYARGYDITDSSSNQMSIYHQNHALAGSRGGLSSAGGTGGGVGGSRQGGVGGVGVVG
PRRSCSKASSSKRKNQNIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGV
YNKSSMYSLALKCLISLSTVILLGLIIAYHAREVQLFVIDNGADDWRIAMTLNRVLLISL
ELLVSAVHPVPGDFKFQWRARLAFSYAPSQAEADLDMVLSVPMFLRLYLIARVMLLHSKL
FTDASSRSIGALNKVHFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDAQ
DVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLEL
TKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLQKKIDHSRVRKHQRKFLQAI
HQLRSVKMEQRKLSDQANTLVDLSKMQSVMYELMSELNDRSEDLERQMLSLETRVEQLTA
GFSALPAHLSATLSAQHTTLLHLLRERDARDYRGGGWGGXQVEEGQPWSLLIXLAPAHAL
TPSPTLAPEPQQPPEGTIEGSTSPNTSTSSC
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggagccccctccctctctgagcttgactctcttgggaagcagtgaggacgaggacccg
cggttccccctgccactgagtggaatctcccactcctccatgaccggcaactacccggga
tcaaaccactccaaccacagggggggatccagcctggaccggctgaatgggtcccccacc
acgcctaacatgccacaggcctccctccccaaactgcctctgtcctcagtggggggtcaa
cccctgccccccctccccaatgcccttcaccccaccagcacccctctgtcctcgtgcctc
ggttcccaacacagcctgagtggggacaactccccagtatacaacaccctcttctactcc
tcacactccccctccatggagagagagagggacagggatagagagagggggtgtaagcac
cgccagcccagcccgctggtccatcggagagacagcaaccctttcacggagatcgccatg
agctcctgtaaatacacaggcggtgtgatgaaacctctcagtcgtctcagcgcctccgac
gtaacctcatcgaatcagacagcggcagcgacaccaaagagtgtggggcagcacctgtta
ccggcgcaactgccattggagggcgggaccgagacagagaggctccacccacttcctatc
cttgccatcgtccaatcaaccgacccagaatcctccagagatcgtgatnnctcatcaaaa
gaggactcgccgtacgcgaggggttatgacatcaccgactcatcctccaatcagatgtca
atataccatcagaaccacgccttggcggggagtagggggggtttaagcagtgcagggggc
acaggagggggtgtagggggcagcaggcagggaggtgtaggaggtgttggggttgtaggg
ccgagaaggagctgctccaaggcttctagttctaaacgtaagaaccagaacattggttat
aaactgggccaccggagggcgctgttcgaaaagaggaagaggctgagcgactacgcactc
atcttcggaatgtttggcatcgtcgtcatggtgatcgagacagagctgtcctggggcgtt
tacaacaagagctccatgtactctctggccctgaagtgtctgatcagcctgtctacagtc
atactgctgggcctcatcatagcctatcatgcacgagaagtccagctcttcgtcatcgac
aacggagcggacgactggcgcatcgccatgacattgaatcgggtgttgctgatatcgttg
gaactactggtgtcggcggtgcatccggtgcccggggactttaagttccagtggcgggca
cgtctggcgttctcttacgccccgtcccaggctgaggctgacctggacatggtgctgagt
gttcccatgttcctccgcctctacctcatcgcccgcgtcatgctgctgcacagcaaactg
ttcactgatgcctcctcacggagcataggggccctcaataaggtgcactttaatacgagg
tttgtgatgaagactctgatgaccatctgtccaggcactgttctcctggtcttcagcatc
tcactgtggatcatcgctgcctggaccgtacgagtgtgtgagaggtatcatgatgcccag
gatgtgaccagtaacttcctgggggcgatgtggctcatctctatcaccttcctgtctatt
ggctacggagacatggtgcctcacacatactgtggcaaaggagtctgtctactaaccggc
attatgggtgcaggctgtacagctctagtggttgccgtggtagcaaggaagctggagttg
accaaggcggagaaacacgtccacaacttcatgatggacacacaactcaccaagaggata
aaaaatgctgcggccaacgttctgagggagacttggctcatctacaaacacaccaaacta
cagaagaagatcgaccactccagagtccgcaaacaccagaggaagttcctgcaggccatc
caccaactgcgtagtgtgaagatggagcagaggaaactgagtgatcaggccaacactctg
gtggacctctcaaagatgcaaagcgtgatgtacgagctgatgtcagagctgaacgaccgc
agtgaggacctggagcggcagatgctgtctctggaaacacgggtggagcagctgaccgcc
ggcttcagtgccctgcctgcccacctgtctgccacgctgtctgcccagcacaccaccctg
ctccacctgctccgagagagggacgccagggactacagaggaggaggatggggaggtnng
caggtggaggagggacagccctggtccctgttaatcnagctggcccctgcccatgccctg
actccaagcccaaccctggccccagagccacagcagcccccagaaggaaccatagagggc
agcactagtcccaatactagcacctctagttgttga
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