KEGG   Coregonus clupeaformis (lake whitefish): 121542741
Entry
121542741         CDS       T08357                                 
Name
(RefSeq) beta-1-syntrophin isoform X1
  KO
K24064  beta-syntrophin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121542741
SSDB
Motif
Pfam: Syntrophin_4th PH_17 PDZ PH PDZ_2 PDZ_6
Other DBs
NCBI-GeneID: 121542741
NCBI-ProteinID: XP_045069802
LinkDB
Position
Unknown
AA seq 530 aa
MAVATVISGNRVQKSGFLEVLVRDRWHKVLANLNEEALTLSCEDLGENENLNGITNGSYG
SNATHPDHKNSPKTAVRTAFTDLQEQVPEAIANRKRCVKVIKQEAGGLGISIKGGKENKM
PILISKIFKGLAADQTQALYVGDAILSVNGVNLRDATHDEAVQGLKRAGREVTLEVKYMR
EATPYVKKGSPVSEIGWETPPPESPRLGSPHSDVPLTPTMSLQGDRRYIPLKMCYITRSM
TAPDPDNRQLELHSPDAKHTVVLRCKDTASAQAWFEVMQSATSNLINKVITEVKEHTGRT
GIAGSREIRHLGWLAEKTENEKQQWKPVLVMVTEKDLLLYDSLPRMKASWHSPAHTYPLL
ATRLVRSGPDRGSPQPGVELSFATRTGTRLGIEAHLFRVETCKDLSLWTRHIVTGCHSSA
QMIKEVTTSCMYQGQECRLVIHYEHGFSVLAEQQGEDQVDQGNQNQAKPLLCYPFERLKM
SSDDGVRVLFLDFSGKEGEIQLDLHSCPKPIVFILHSFLSAKIARLGLVA
NT seq 1593 nt   +upstreamnt  +downstreamnt
atggcggtagctacagtaatttcggggaacagagtacaaaaaagtggatttttggaggtt
ttggtgagggaccgatggcacaaagttttggccaacttgaacgaagaagccctaacgctg
agttgcgaggatctgggagagaatgagaacctaaacggcatcaccaatggatcttacggg
agcaacgcaactcacccggatcacaagaacagtccgaaaactgcggtgaggacagctttc
acggatttacaggagcaagtgccagaggcgatcgctaacagaaaaagatgcgtgaaagta
ataaagcaagaggcagggggactcggcatcagcattaaaggaggaaaagagaataaaatg
ccgatacttattagtaaaatcttcaaaggtctggctgcggatcaaacccaagccttgtat
gtcggggacgcgattctgtctgttaacggtgtgaacctgcgagacgctacgcatgacgag
gcggtgcaggggctgaaacgagccgggagagaggtgacgctagaagtgaagtacatgcgg
gaagccaccccctatgtgaagaagggttctccggtgtcagagataggctgggagacgcca
ccaccggagtccccgaggctgggcagcccccactctgacgtccccctcacccccaccatg
tccctacagggggacaggaggtacatccccttaaagatgtgttacatcaccaggagcatg
actgctccagaccctgataacaggcagttggagctgcactctcccgatgccaagcatacg
gtggtgttacggtgtaaagacacagcctcggcccaggcctggttcgaggtcatgcagtcg
gcgacctctaacctcatcaacaaggtcatcacagaggtcaaagagcacacaggaagaaca
gggatcgcagggagcagagagatcagacacctgggctggctggctgagaagacagagaat
gagaagcagcagtggaagccagtgctggtgatggtgacagagaaagacctgctcctctat
gacagtcttccacggatgaaggcatcctggcacagccctgcacacacatacccactgtta
gctacacggctggtgcgctctggtcccgaccgaggctctccccagccgggcgtggagctg
tccttcgccacgcgtacaggcaccagactgggcattgaggcccacctgttcagagttgag
acctgtaaggacctttcactgtggaccaggcacatcgttacgggctgtcactcctctgcc
cagatgatcaaagaagtcaccaccagctgtatgtaccagggccaggagtgcaggctggtg
atccactatgagcatggcttctctgtcctggctgagcagcagggggaggaccaggtggac
cagggaaaccagaaccaagccaaacctctgctctgctaccccttcgaacgcctcaagatg
tcctctgacgacggggtcagggtgctcttcctggatttcagtggaaaagagggtgaaatt
cagctggacctccactcgtgcccaaagcctatcgtcttcattctccactcattcctctcg
gcaaagatcgccagacttggcctggtagcatag

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