Coregonus clupeaformis (lake whitefish): 121542744 Help Entry 121542744         CDS       T08357                                  Name (RefSeq) collagen alpha-1(XIV) chain-like   KO K08133   collagen type XIV alpha Organism cclu  Coregonus clupeaformis (lake whitefish) Brite KEGG Orthology (KO) [BR:cclu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:cclu00535]     121542744 Proteoglycans [BR:cclu00535]  Extracellular matrix (ECM) proteoglycans   Others    121542744 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA fn3 Collagen VWA_2 NDNF VWA_3 FN3_Tor_3rd Motif Other DBs NCBI-GeneID:  121542744 NCBI-ProteinID:  XP_045069799 LinkDB All DBs Position Unknown AA seq 1836 aa AA seqDB search MKEYHVRVLAVSGNQQAEHYKGKYAAQDLEGEDGEAEGTLPLRLDDTGGAEDINEISGVD PFVCTTQAIADIVILVDGSWSIGRINFRLVRMFLENLVNAFSVGIDQTRIGLAQYSGDPR IEWHLNAFSTKDAVLDAVKNLPYKGGNTLTGLALTYILENSFKPESGSRSGVPKVGILIT DGKSQDDVIPPAQSLRDAGVELFAVGVKNADENELRAIASEPDHTHVYNVADFSIMSSII EGLTKIVCERVEDQDKEIKGESAEQETRGAPQDLVISEVTARSFRVSWSHAPGSVEKYRV VYYPATQGGRPEESVVDGTENSVVVQNLNSLTEYQLAVFAVYTSSASEALRGSETTLALP MVNGLELYDVTHNTMRARWSGVQGVSGYTVLYAPLTEDVASDEKEMKVSDAVTDLELGAL TPATEYTVTVYAMYGEEASDPMTNQETTLPLSPPKNLVFSEVDHNSAKLSWEAASRKVTG YRIMYVKTGGRQTNEVEVGPVTSWTLNDLTSVMEYEVAIFGIYNEGQSEAISGMFTTDPV PGPVDLQASEVTTESFRVSWGHSVPGIVLYKLTWASYDGEDTKEMVLSGDVDSFLLSGLS PNTEYEVMLQAIFKDQSESDAVLVVETTLARTTTVATTTPVARQAVRGLQVQYETTYSLE VSWQLEDPKVDQYRVTYVSLTGDRNEESVLVPGQQTTVLLQPLLSDTEHKVTVTPVYTDG QDGISVSSVGRTLPLSAPSNLRVSEEWFSRFRITWDTPPSPTMGFRVVYQPTTVPGSALE TFVGDDVNTMLILNLRSDTEYSVKVIASYTTGSSQPLQGTAKTLYLGVTNLNTYQVMMSS LCAQWQPHRQANLYRVVIESPLNGQKQEVSVGGSASRQCFYGLTPNSQYQISVSTQLQDM EGPAVTTITTTLPAPTQPPTPPPTSPPLPTIPPAKEVCKAAKADLVFLVDGSWSIGDDNF QKIIRFLYSTMGALDLIGPDGTQVAIAQFSDDARTEFKLNSYANKETLLDAIQRITYKGG NTKTGRAIKHVKESIFTSEGGVRRGVPKVLVVLTDGRSQDDVNKVSKEMQMEGYIIFAIG FADADYGELVNIASKPSDRHVFFVDDLDAVKKIEEQLITFVCEAATATCPSVLMSGNTMA GFRMMEMFGLVEKEYSNVEGVSLEPGTFNSFPCYRLHKDALVSQPTKYLHPEGLPSDYTV TILFRLLPETPQEPFALWEILNKDNEPLVGVILDNSGKTLTFFNHDYKGDFQTVTFEGPD IKKMFYGSFHKLHMTVSKTTARVVMDCKVVGEKPINAAGNISIDGVEVLGRMVRSRGKRN NSAPFQIQMFDIICSTSWASRDKCCELPGLRLEEDCPAMPHACSCSQDSKGPPGPTGPPG GAGIRGARGNQGEPGNVGPQGLVGDKGPPGPQGPPGPQGPSGHSIQGPPGGNGEKGEKGD IGFPGPQGIGGSPGGPGRDGQVGQRGLPGKDGPQGQQGTTGPIGSPGAPGAPGGSGSPGP LGDQGPPGSAGTKGEKGERGDLQSQATVRALAHQVCEQLIQSHLSRYNSILNQIPSQSVS VRTVPGPPGEPGHRGLPGSQGEGGPPGRPGFPGTNGQNGRPGERGFPGEKGERGSQGVGT QGPRGPPGPPGLLGEGRTGSQGPPGRPGSQGPPGRPGTPGSTGPAGAAGYCDQNSCLGYN VGVQQLPHTNYQNYDPTGRYDPRGNYNNDEEEEDDEEEDPYAGYRGYPPQYYQPNYPAPQ SHSQDTELRSPGIMMRRFSRDVVTQRRATANTAQTGHTDQTGQRSEAAADTEGEVEVIGE AQTGHTDQTGQRSDAAADTEGEVEVIGEAQTEQPPF NT seq 5511 nt NT seq  +upstreamnt  +downstreamnt atgaaggagtaccacgtcagggttctagcagtgagtgggaaccagcaagcagagcactac aaggggaagtatgcagctcaagacctggagggtgaggacggagaggctgagggcacattg cctctgagacttgatgacactggaggggctgaagacatcaacgagatatctggagtggat ccttttgtctgcacgactcaggccatagctgacatagtgatcctggtggatggatcctgg agcatcggcaggatcaacttccgcttggtccgcatgttcctggagaacctggtcaacgct ttcagcgtcgggatcgaccagaccaggataggtctggcccagtacagtggggaccccagg atagagtggcatctgaatgccttcagcactaaagatgcagttctcgatgctgtgaagaac ctgccctacaagggaggcaacacgctgacaggcctggccctgacctatatcctggagaac agcttcaagcccgagtcgggctccaggagcggcgtacccaaagttggtatcctgatcaca gacgggaagtcccaggatgatgtgatcccccccgcccagagcctgagggatgctggcgtc gaactcttcgccgtcggtgtgaagaacgctgatgagaatgagctgagggccatagcttct gagcctgaccacactcatgtgtacaacgtggcagacttcagcatcatgagctccataata gagggacttaccaagatagtatgtgaacgggtagaggatcaggacaaggagatcaaagga gagtctgcagaacaggagacacggggagctcctcaggacctagtgatatcagaggtgaca gccaggagtttcagggtgtcctggagtcacgcccccggcagtgtagagaagtaccgtgtg gtgtattacccagctacccagggaggacggcctgaagagtctgtggtggacggcacagag aactctgtggttgtgcagaatctcaactccttgacagagtaccagttagctgtgtttgct gtctacaccagctcagctagcgaggcacttcgtggcagcgagaccacattggctctcccc atggtgaacggcctggagctgtacgatgttacccacaacactatgcgggcgcggtggagc ggtgtgcagggcgtctcggggtacacggtcctctacgcccccctgaccgaggacgtggcc tccgacgagaaagagatgaaggtgtcagacgcagtaactgatctggagctgggggccttg actcctgctacagagtacactgtgacagtctatgccatgtatggagaagaggctagtgat cctatgactaaccaggagaccaccttgccactgagccctcccaagaaccttgtgttctct gaggtggaccacaactcagccaaactgtcgtgggaagctgcctctaggaaggtgacagga taccgcattatgtacgtcaagactggcgggcgacagactaatgaggtggaggtgggtcca gtcacgtcctggactctaaatgacctgacgtctgtaatggagtatgaggtggccatcttt gggatctacaacgagggccaatcagaagccatctctggcatgttcaccaccgaccctgtg ccaggccccgttgacctccaggccagtgaggtcaccacagagagcttccgggtcagctgg ggtcactctgttccgggcatcgtcctctacaaactgacctgggcttcttatgatggagag gacactaaggagatggttctaagtggtgacgtggactccttcctcctcagtggactgagc cctaacacggagtatgaggtgatgctccaagccatcttcaaagaccaatcagagagtgat gcagtgttagtggtggagacaacacttgccaggacaacaacggttgccactacaacgcca gtggcacgtcaggcggtgagaggcctacaggtccagtatgagaccacctacagtctggag gtgtcatggcaactggaggaccctaaggtggaccagtacagagtcacctacgtcagcctc acgggagaccgcaacgaggagtcagtcctggtgcctgggcagcagaccacagtccttctc cagcctttgctgtctgacacagagcacaaggtgaccgtcaccccagtctacacagacgga caggacggcatcagtgtgtcttctgtgggcagaacattgcccctctcagcacctagcaac ctgagggtgtctgaggagtggttcagccgcttccgcatcacctgggacacgcctccttct cccaccatgggcttcagggtagtctaccaacccaccactgtgccggggtcagctctggag acctttgtgggagacgacgtcaacaccatgctgatcctgaacctgcggagtgacactgag tacagtgtgaaggtcatcgcttcctacaccacgggatccagccaaccactccagggcact gccaaaacattgtacctgggcgtgaccaacctgaacacataccaggtgatgatgtccagt ttgtgtgcccagtggcagccccatcgccaggctaacctctacagggtggtcatcgagtct ccgctcaatggccagaagcaggaagtgagtgttggaggctctgcgtctagacagtgtttc tatggtctgactcctaacagccagtatcagatcagtgtttccacccagctacaagacatg gaggggcctgctgttaccaccatcactactacacttcctgcccccacccagccaccgaca ccaccccccacgtcaccccccctaccgaccataccgcccgccaaggaagtctgtaaggca gccaaagctgacctggtcttcttggtggacggctcttggagcatcggagacgacaacttc cagaagattatccgtttcctgtacagtacgatgggagctctggatctgattggtcctgac ggcacacaggttgctatagcacagttcagtgatgatgccaggacagagttcaagctgaac tcatacgctaacaaggaaacgctgctcgacgccatccagcgtatcacatacaagggaggg aacaccaagacaggccgagccattaagcatgtgaaggagtctatcttcacctcagaggga ggagtgaggaggggggttcccaaggtactggtagtcctcaccgatggccgctcccaagat gacgtcaacaaagtctccaaggagatgcagatggagggctacatcatctttgccattggc tttgctgatgcggactacggagagttggtgaacatcgccagcaaacccagtgacagacac gtcttctttgtggacgatctggacgctgtcaagaaaattgaggagcagctgatcactttt gtgtgcgaggctgccactgccacttgtccatcggttctgatgagcggcaacactatggca ggcttcaggatgatggagatgtttggcctggtagagaaggaatacagtaacgtagagggg gtgtccctagaaccaggaaccttcaacagcttcccctgctacagactgcacaaagacgcc ctggtctcacagcccaccaagtacctccacccagaaggtctgccctctgactacaccgtc accatcctgttccgcctgctaccagagaccccccaggagccctttgcattgtgggagatc ctgaacaaagacaatgaacccctggtgggggtcatcctggacaacagtgggaagactctg acgttcttcaaccacgactacaagggagacttccagacagtcacatttgaagggcctgac atcaagaagatgttctatggcagtttccacaagctccacatgacggtcagtaagaccaca gccagggtggtgatggactgtaaggtagtgggagaaaagcccatcaacgcggctggcaac atcagtatagacggggtggaggtactgggacgcatggtacgatccagagggaagaggaac aactcagctccgttccagatccagatgtttgacattatctgcagcacgtcctgggccagt cgagacaagtgctgtgagctccctggactgaggctggaggaggactgtcctgccatgccc catgcctgtagctgttctcaggacagtaaaggacctcctggacccacgggaccccccgga ggtgctggtatcagaggggccagaggaaatcaaggggagccaggcaatgtggggcctcaa ggactagttggtgataaaggccctccaggaccacagggcccccctggtcctcaagggcct agtggacattccatccagggaccaccgggtggtaatggtgaaaagggagagaaaggagat attggtttcccaggacctcagggtattggtggatctcctggcggaccaggaagagatgga caagttggacagaggggcctgcctgggaaggatggaccacaaggacagcagggtactaca ggccccattggcagtcctggagcacccggggcccctggtggaagtggctctcctggaccg ctgggagaccagggaccacctggctctgctggtaccaaaggagaaaagggtgaacgggga gacctgcagtctcaagctaccgtcagggccttagcacaccaagtgtgtgagcaactgatt cagagtcacctgtctcggtacaactccatcctgaaccagatccccagccagtcggtgtct gtgaggacggtaccaggacctccaggagagcctggtcacagaggtctgccagggtcacag ggagagggggggccccctggcagaccagggttccctgggaccaacggtcagaatggacga ccgggggagagaggtttcccaggagagaagggggagagggggagtcaaggtgtggggaca cagggccccagaggtcccccagggccaccaggtcttctaggagagggccgtacaggcagc caggggcccccaggtagaccaggtagccagggccccccagggcgaccgggcacccctgga tccacgggccccgctggtgctgctggctactgtgaccagaactcctgtttgggctacaac gttggagtacaacaactcccccacaccaactaccaaaactatgaccccactggccgctat gacccccgtggaaattacaacaacgacgaggaagaggaagatgatgaggaagaggaccca tacgctgggtatagaggctacccccctcagtactaccagcccaattaccctgcaccccaa tcccactcccaggacactgagctaaggtccccagggataatgatgaggcgcttctccaga gacgtggtcacacagaggagagccaccgctaacacagcccagacaggacacacagaccag actggacagaggagcgaagctgcagcagatactgaaggagaggtggaggtgattggagaa gctcagactggacacacagaccagactggacagaggagcgatgctgcagcagatactgaa ggagaggtggaggtgattggagaagcccagacagaacaaccacctttctaa

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