Coregonus clupeaformis (lake whitefish): 121542785
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Entry
121542785 CDS
T08357
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04145
Phagosome
cclu04814
Motor proteins
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121542785
09142 Cell motility
04814 Motor proteins
121542785
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121542785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121542785
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121542785
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
121542785
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
121542785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Dynein_IC2
WD40
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
121542785
NCBI-ProteinID:
XP_045064484
LinkDB
All DBs
Position
28:complement(10079172..10106560)
Genome browser
AA seq
621 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKESESLQQKTENVSEDSDLDRKRRET
EALLQSIGISPEPPLVSTTSDAGSQESVDGGRVGRYRTLQWDTDPSALQLQADSELGRRM
HRLGASKIVQIDFLPKELVTYTKETQTPSAAHQSEEEEEDEEGTEPKAAPQTDQSEEEGE
AEDSKEAHPRELTEEEREQILHSDDFLVFFERSVSVVERALAEEGDIFFDYSGRDLEDKE
GDMQGGSNLSFNRVFHDEHWSKHRVVTCLDWSPQYPELMVASYNSNEDAPHEPDGIALVW
NMKFKKTTAEYTFHCQSSVMSVGFAQFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLS
AAAHTHPVYCVNVVGTQNANNLITVSTDGKMCSWSLDMLSQPQESMELVYNKSKAVAVTG
MAFPAGDVNNYVVGSEEGMVYSASRHGSKAGIAEMFEGHQGPVTGISCHNAVGTVDFSHL
FITSSFDWTVKLWSTKHNKPLYSFEDNADYVYDVSWSPVHPALFASVDGMGRLDLWNLNN
DTEVPTASVTIEGACALNRVRWASGGREVAVGDSEGRVWIYDVGELAVPHPEDWSRFART
LVEIRANCGDGEEEGAVELAA
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgacctgaaagctgagctggagcgaaagaaacagaggttagctcaa
atacgagaggagaagaagagaaaggaggaggagaggaaaaagaaggagtctgagagtctt
cagcagaagacagagaatgtctctgaagattctgacttggaccgcaaacgaagagagacg
gaagcgctgctgcagagtattgggatctcaccagaaccaccattagtgagcaccaccagt
gatgctggcagccaggagtccgtagatggtgggagagtgggaagatataggaccctgcag
tgggacacggacccctctgctctccagctgcaggccgactctgagctggggcgcaggatg
cacagacttggagcgtcaaaaatagtacagattgacttccttcccaaagagcttgtgacc
tacactaaagagacccagactccttcagcagcacatcaatctgaagaagaagaagaggat
gaggagggtactgagcctaaagctgcccctcagactgaccagtcggaggaggagggagag
gcagaggacagtaaagaggcccaccccagagagctcacggaggaggagagggaacagatc
cttcactccgacgacttcctggtcttctttgagcggtcggtctctgtggtggagcgggcg
ctggccgaggagggagacatcttcttcgactacagcggcagggacctggaggacaaagaa
ggggacatgcaaggtggatccaatctgtctttcaaccgtgtgttccatgatgagcactgg
tccaaacacagagtagtcacctgcttagactggtccccacagtaccctgaactgatggta
gcctcttacaacagcaacgaggatgctccacatgagcctgatgggatagcgctggtgtgg
aacatgaaattcaagaagaccaccgcagagtatacgtttcactgccagtcgtcggtgatg
tctgtgggctttgctcagttccatcctaacctggtggtggggggaacgtactcaggacag
attgtgttgtgggataaccgtagtcacaggaggacccccgtccagaggacccctctgtct
gctgcggcacacactcacccagtgtactgtgtgaacgtggtgggtacccagaatgccaac
aacctgataacagtgtctactgatgggaagatgtgctcctggagtctagacatgctctct
cagccacaggagagtatggagctggtgtacaataagtccaaggctgtagcagtgacagga
atggccttccctgccggagatgttaacaactatgtggtaggaagcgaggaagggatggtg
tactctgcgtcccgccacggcagtaaagcaggtatagcggagatgtttgaggggcaccag
ggcccagtgactgggatcagctgccataacgctgtgggcactgtcgacttctcacacctc
ttcatcacgtcctcctttgactggacagtcaaactgtggtcaaccaaacacaacaagcca
ctgtactcttttgaggacaatgcagactatgtctatgatgtcagttggtcccctgtgcat
ccggctctctttgcctctgtggatgggatgggccgtttggacctgtggaacctcaacaat
gacactgaggtgcccacagcgagtgtgactatcgagggggcgtgtgctctgaaccgtgtg
agatgggcgtcgggaggcagagaggttgccgtgggtgactcggagggtcgtgtctggatc
tacgatgtgggagagctggcagtgccacaccctgaggactggagccgcttcgcccgcacc
ctggttgagatccgtgccaactgcggtgatggagaggaggagggggccgtggagctggca
gcctga
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