Coregonus clupeaformis (lake whitefish): 121542811
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Entry
121542811 CDS
T08357
Name
(RefSeq) intermediate conductance calcium-activated potassium channel protein 4
KO
K04945
potassium intermediate/small conductance calcium-activated channel subfamily N member 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121542811
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121542811
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
IRK
Gpr1_Fun34_YaaH
Motif
Other DBs
NCBI-GeneID:
121542811
NCBI-ProteinID:
XP_041708300
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All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MEMTTRNLHLDSKVDNCDGVINRNGVDMTEISVPLSHPGKRMPQIEGDNLYRLRDRKFLL
EDKKRLCAWALGTALLGTLLMILHAELCPFIYQSDSRYAFIIHCSISMSTGCLLILIVAF
HYKDIRLFIIDHNQVDWRIAMTSRRVLGISLELLVCAIHPVGTYWEVGVPAPIAREGVEV
NSSNSAPLCVSSRHGEALLDTELLLSVLMFLRLYLVHRTILLHSKVLLSASYRSIGSLNN
INFTFRFVLKVLMNKYPARTLMGFIFLFWLIASWMLTLCERQTQEETGRMDTALWLIAIT
FLTVGYGDVSPKTSCGKVVCLFTGVMGVACTAMLVAVMTKKLALNKGEKHVHFFMMDIQI
SKRIRHAAANVLRECWLLHRTNLTKGNSGEHRRHQRCLLEAIRVFRHLRLKQRKLRDYAS
EMVDLPKMQMIMCDLSANWNNSYRELEQRIISMEQKLDELGHCFQQTSELLAQALRYRNP
EIR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggagatgacaacccgcaacttgcacctcgactccaaagttgacaattgcgatggagtg
atcaacagaaacggcgtggacatgacggagatatctgtgccactgtcccaccccgggaag
cgtatgcctcaaatcgagggggacaatctttatagattgcgagacagaaagtttttattg
gaggacaaaaagcgtctgtgcgcttgggctctgggcaccgcactgcttgggacactgctc
atgatactgcacgcggagctgtgcccgtttatttaccaatcggactcccgctacgccttt
atcatccactgctccatcagcatgtccactggttgtcttctgattctcatcgtagccttc
cattataaggacatcaggctcttcatcattgaccacaaccaggtggactggcgcatcgcc
atgacaagccgcagggtgctgggcatctccctggaactgctggtctgtgccatccaccct
gtgggcacctactgggaggtgggcgtccccgcgcccatcgccagggagggggtagaggtc
aactcgtccaactcggcgccgctgtgtgtgtcctcccgccacggggaggcgctgttggac
acagagctgctgctgtcggtgctgatgttcctcaggctgtacctggtccacaggacgatc
ctactgcacagcaaggtgctgctcagtgcctcctataggagtatcggctcgctcaacaac
atcaacttcacgttccgcttcgtgctcaaggtgctgatgaacaagtacccagcgcgcacg
ctgatgggtttcatcttcttgttctggctcatcgcctcctggatgctcacgctgtgtgag
aggcagacacaggaggagactggtcgtatggacacggctctctggctcattgccatcacc
ttcctcaccgtaggatacggggacgtgtcccccaaaaccagctgtggcaaagtggtgtgc
ctcttcaccggagtcatgggtgtggcctgtaccgccatgctggtggccgtcatgaccaag
aagctggcgctgaacaaaggagagaaacacgtgcacttcttcatgatggacatccagatc
tccaaacggatacgccatgctgctgccaatgtgctgagggagtgctggctgctgcaccgc
accaacctgaccaagggcaacagtggagagcaccggagacaccagaggtgcctactggag
gccatcagagtattccggcacctgcgcctcaaacaacggaagctgagagattacgccagc
gagatggtcgacctgcccaagatgcagatgatcatgtgcgatttgagtgccaactggaac
aactcgtaccgggagctggagcagcgcatcatctccatggagcagaagttagacgagctg
ggccactgcttccaacagacctctgagctgctggcacaggccctgcgctaccgcaaccct
gaaatcaggtga
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