Coregonus clupeaformis (lake whitefish): 121542832
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Entry
121542832 CDS
T08357
Name
(RefSeq) basal cell adhesion molecule-like isoform X1
KO
K06578
basal cell adhesion molecule
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121542832
04090 CD molecules [BR:
cclu04090
]
121542832
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Other
121542832
CD molecules [BR:
cclu04090
]
Proteins
121542832
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
Ig_PDGFR_d4
Ig_5
C2-set_3
C1-set
Orf78
DUF3377
Insulin_TMD
Psg1
Motif
Other DBs
NCBI-GeneID:
121542832
NCBI-ProteinID:
XP_041708325
LinkDB
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Position
28:complement(21523872..21601389)
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AA seq
618 aa
AA seq
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MDGMVTFGRTSLLCTFLLCFSLQVCWAAVTVSVTPKVEVIKGESASLPCTFKIPPSLNNI
VEWFIEEGGTRKRVAFRSVSGGEGKSDEGTRLSGRVTIGSDFSLTISPVAVEDQLPFYCQ
VTAGPAGVGEAITQLKVFFAPEMPEVTGSNQAISVGDSSTQVGQCVSHNGHPQPRIIWFQ
DSKPLPEVKDNKEKVYMVPSVVKEASGLFTITSTLMMQPQKADKDSVFHCTVEYSMPNDM
IKKIDSDTFSLTLNYPSETATFVLANTEPIREGDEVKMMCETDGNPQPEFEFYKDGKNIE
EGVAGGLLTLKSVKRSDAGVYKCMATDFDNLDADLSGEVTISVHYIDPLSVSPAGPLSTM
MGDMVELQCKTKASDPHTVQWKKGSTVLSQTGVLSLKSVTFAEAGEYSCVGAVPSVLGLT
SKASINLTVSGKPEIDAAVDGMVEKEGDMVTLSCSAHGHPAPQFTWTPSGKESVAVKGNK
VVSTVMLEASAVVLKDGVTCEASNDHGAASQAFKVTIKQAVDPNAANDAGRGNHVLKTAD
KQQGGSSGVVIAVVVCVLMLLLLVALIYFLNKKGKLPCSKKDKKEVASGDVNNDIVVEMK
TEKANEEAGLLNKPGAQQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggacgggatggtaacatttggacgcacttcgctcttgtgcaccttcctgctttgcttt
tcattgcaagtgtgctgggccgccgtgacagtgtcagtgactcccaaggtggaggtgatc
aagggagagtcagccagcctgccctgcaccttcaaaatccctccctcccttaacaacatc
gtagagtggttcattgaggagggtggcaccaggaagcgcgtggcgttccgctccgtgtcg
ggtggcgaggggaagagtgacgaggggacacgtctgtccggcagggtgaccattggaagt
gacttctctctgaccatctcccccgtggcggtggaggaccagctgcctttctactgccag
gtcactgctggccctgccggggttggagaggccatcacacagctcaaagttttcttcgct
ccagagatgccagaggtcactggatccaaccaggccatatctgtaggcgactcctccaca
caggtgggtcagtgtgtgagtcataacggtcacccccagcccaggataatctggttccag
gactccaagcctctgcctgaggtcaaggacaacaaagagaaggtgtacatggtgccgtcg
gtggtaaaggaggcatcaggtctgttcaccatcaccagcaccctgatgatgcagccccag
aaggctgacaaggacagcgtgttccactgcaccgtggagtacagcatgcccaacgacatg
atcaaaaagatagactctgacaccttctccctcaccctcaactatccctctgagacagcg
acctttgtcctggcgaacactgaaccaatcagagagggtgacgaggtgaagatgatgtgt
gagacagatggaaaccctcagcctgagtttgagttctacaaagatggtaaaaacattgag
gaaggagttgcagggggacttttgactttgaagtccgtcaagcgttcggatgctggggtg
tacaagtgtatggccactgactttgataacctggatgctgatcttagcggagaagtcacc
atctctgtccactacattgacccattgagtgtgagccctgccggtccattgtcaaccatg
atgggagacatggtggagctgcagtgtaagaccaaggcctcagacccacacaccgtccag
tggaagaagggctccacggtgctgtcccagacgggtgtcttgtctctgaagtcggtgaca
ttcgctgaagctggcgagtactcctgtgtgggcgctgtaccctctgtgctcgggctcacc
tccaaggccagcatcaatctcactgtctcaggtaaacctgagattgatgcagctgttgat
ggaatggtggagaaggagggagacatggtgactctgtcctgctctgctcacggacaccct
gccccacagttcacctggacaccctcaggaaaggagtcagtggcggtgaagggtaacaag
gtggtcagtacggtcatgctggaggccagtgctgtggtcctgaaggacggggtcacctgc
gaggccagtaacgaccacggagcagcctcccaggccttcaaagtcaccatcaaacaagcc
gtagatcccaacgcagccaatgatgcaggcagagggaaccatgtgcttaaaacagctgat
aagcagcagggtggctccagtggcgtggtgatagccgtggtggtgtgtgtcctaatgctg
ctgctgctggtggcactcatctacttcctcaacaagaagggcaagctgccctgcagcaag
aaggacaagaaggaagtggcgagtggggatgtgaataatgacattgtggtggagatgaag
acagaaaaggccaatgaagaagctggcctcctgaacaagccaggagcacagcagtga
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