Coregonus clupeaformis (lake whitefish): 121542834
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Entry
121542834 CDS
T08357
Name
(RefSeq) atlastin-3 isoform X1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121542834
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121542834
Autophagy
ER-phagy
ER-phagy recepters
121542834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GBP
GBP_C
Oleosin
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
121542834
NCBI-ProteinID:
XP_041708331
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Position
3:complement(25335664..25345304)
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AA seq
511 aa
AA seq
DB search
MGSEPGPVQIVTVCKEDHSFALDTEALGRVLLAPEVRDKHVVVLSVAGAFRKGKSFILDF
MLRYMYRKKHGEEWLGQEDEPLTGFKWRGGSEPETTGIQLWSEVFLVEKSNGTEVAVLLM
DTQGAFDNQSTVKDCATIFALSTMTSSIQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIF
LKPFQSLMFLIRDWSFPYEYKYGLKGGSEFLDKRLQVKETQHEELQTVREHIHSCFTSIN
CFLLPHPGLKVATSPAFKGQLSDVAPEFKEELRNLIPTLLHPDSLAEKEINGNKVTCRGL
LEFFKAYIKIYQGEDLPHPKSMLLATAEANNLAAVAAAKDQYYKNMEKVCGGDLPYVAPA
SLEEKHHFFLRESLHVFSSTKKMGGQEFCDRYQDQLEAELVELWQSFRKHNESKNVFTAF
RTPAVLFVLVCFLYVLSGLLLFIGLATIAFACDCVLGLAMVAMLTWAFIRYSGKYRGLGG
AIDQTAGVILQQATVVLNKSRPAVAKMKKSS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggggagtgagccaggtccagtccagattgtgacagtgtgcaaggaggatcactccttt
gccttggacacagaggctttaggacgggttctgcttgcaccggaggtccgggacaaacat
gtggtggtgctctcagtggccggggccttccggaaaggcaagagcttcattctggacttc
atgctccgctacatgtacaggaagaagcatggtgaggagtggctgggtcaggaggatgag
cccctgactgggttcaaatggagggggggctcagagccagagactaccggcatccagctg
tggagtgaggtcttcctggtggagaagagcaatgggacggaggtggcagtattattgatg
gacacccagggcgcatttgacaaccagtccaccgtaaaggattgtgccacaatctttgcc
ctcagtaccatgaccagctcaatacagatctacaacctttcacagaacattcaggaagat
gatctgcagcagctgcagctgttcacagagtatggacgcctcgccatggatgaaatcttc
ctgaagccatttcagtctctgatgttcctaatcagggactggagctttccctatgaatat
aaatatggtctgaagggaggcagtgagttccttgataaacgtctacaggtgaaggagacc
cagcatgaggaactacagacagtgagagaacacattcattcctgcttcacctccatcaac
tgtttcctgctaccacatcctgggttgaaggtggccaccagccccgctttcaagggccag
cttagtgatgtggctccagagtttaaagaggagctacgcaatctcatccccacactgctg
catccggacagcctggctgagaaagagatcaatggcaacaaagtcacctgcaggggcctg
ctggagttcttcaaggcgtacatcaagatctaccagggtgaagacctgccacacccaaag
tccatgctgctggccacagcagaggccaacaacctggcagccgtggcagcagccaaagac
cagtattacaagaacatggagaaggtctgcgggggagaccttccctatgtggctcctgcc
tctctggaggagaagcaccacttcttcctccgggagtccctccatgtcttctcctccacc
aaaaagatgggagggcaggagttctgtgaccgctaccaagaccagctggaggctgagttg
gtagagctgtggcagtctttcagaaagcacaatgagtcaaagaatgtcttcactgcattc
cggacgcctgcagtgctgtttgtccttgtgtgcttcctgtacgtactgtcagggctgttg
ctcttcatcggcctggctaccattgcttttgcatgtgactgtgtcttgggcctggccatg
gtcgccatgctcacctgggccttcatacgctattcgggaaaataccgggggctgggggga
gccatcgaccagacggcaggcgtcatactgcagcaggccactgtggtgttgaataagtca
aggccagcagtggctaagatgaagaaatccagctag
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