Coregonus clupeaformis (lake whitefish): 121542864
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Entry
121542864 CDS
T08357
Name
(RefSeq) multiple epidermal growth factor-like domains protein 8 isoform X2
KO
K23664
multipile epidermal growth factor-like domains protein 8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
121542864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
EGF_LMN_ATRN
Kelch_HCF
Kelch_1
CUB
EGF_TEN
EGF_laminin
EGF_3
Beta-prop_Calicin
PSI
EGF_CA
Kelch_2
NANM
EGF_Teneurin
PSI_integrin
EGF
DUF6242_C
Motif
Other DBs
NCBI-GeneID:
121542864
NCBI-ProteinID:
XP_041708383
LinkDB
All DBs
Position
28:complement(14381033..14411404)
Genome browser
AA seq
2919 aa
AA seq
DB search
MGTETRDLVSITNAWEGSRLVSKIIGQPHLLHLLHLFQVGERMASLLHGPLLGLLLVTVA
PGCWAGDCKGHRQVLRGPPGYVTDGPGNYSVNGNCEWLIKAPSSNYRIVLNFTFMETECT
YDYLFVYDGDSYQSPLLASLSGTTLPQPIEAKSGKMLLHLFSDANYNLLGFNATYSFSVC
PGACGGHGRCDTASSLCQCHLGWGGADCATPLCPQACILHGTCDKRGERCLCSSDFLGQS
CQLGLRDDSGAGQWWQVSGGDPYTPPRTGSAGVYLSSTGAMYLFGGFDLNRALGDLVKYN
FSMNQWENRSYGHSPAARHSHTAVEWKGNMVIFGGELASAALASDVWMYRPIQDDWQQLG
QSHLHGAPRVANHAAAVVDNYLYIFGGRTEEDMFSSSLYRFGLRGSGVWEAVQPTGGKPP
ATAGHSMVFHPPSRALLVYGGHRPTTARFSVRVNSTDVFHVDRRFWTSFRSRFPATGPRE
RAFHSATVIGNYMVVYGGNVHIHYQEEKCYDEGIFFYHLGCHQWVSAGESLQHRGEAVRG
RYSHVAAVMEGRVLLVAGGYSGIARGDLVAYKVPLFVSSDPGDRDAVCAEAPDESVCLKN
PECSWCEGRCREYQPTNPCGSTGCLGLARFLSDCQSCLVFSGAPGSLPRAPGDFGWCVQN
ESCLPVSDQSACRVDQISGAYGWWGERTRFLTSILSCRTENYVPGLHLLTFQHPRNDSQP
DKVSILRSTSIILSPTTEMDVTLQFRGFIHPLWGAPPPAPPPTETVSMWARIQRLHFEAR
MAAGPNSLQLKEVVGRWAAHQEKETKLLSRPDMGRLFPNLTRGNRYLVQAEGYLNNSGSG
QTSEMALTWNRTTLPGGSEISFLFLEPYRSGSCSGYQSCLACLSDQSCGWCPSLGRCLFR
ALPDLEPCPEDQGEGERHLLLAPPQCTLCEEYRDCSACTQDPYCEWQINSSKKGDYQCSR
RGRLEGSIRDPVGCPKVCNQRRTCGECLSNSSQCAWCESAQACFYFAAYLTKYPYGECRD
WYDSVHSVPQCKQCSALVTCTDCLQTFQCGWCGDYNNPTIGRCLRGDWAGMDDPSVYNCS
VAVAEVRATSPEPQTLAPPRPMEMELELEHLEEGERDAVWSYPTCPDVEECRLGLHSCHP
FATCVNTPTSYECHCERGYTGDGTLHCNQTCYNECREGQCSGSPRFECECSLGWTSDPAT
LVLSGVECDVDCGCNFHSTCITAPGICDHCQDWTTGPQCEHCRPGSFGSALAGGGGCVPC
QCNGHGDPLQGYCHNQTGQCFCTHHTQGPHCESCLPGYYGDPRNNGTCFRQCQGRSVILS
HQSPLSELPISSSLGWRGGVGGKGGLSHCLWVLSVSENLAPCVPGELCPPVALTLHPDSH
TQCTSSYVYVFDGLPRFLSNGVVHSDHNLIGAFCGTTRTQPITVEATSGVISVYFEANVS
SDHPQGFNASFWVRRCREGSEAGEDGSPVCQGGAQCSGGLCQCPQGYGGPYCDRPLCPED
CGLAEVRGSCNLSLGVCVCADGWGGSDCSTPLDSSSLVWETLLDTQLTANQAHRFLHRMG
HSLVSGPQGNLWMYGGLSLSEGILGNVYRYSVLERRWTQMLTSSVEEGSTPSPRYHHASA
LLASHQPLSGAQGATHNLMLVVGGVTQKGVALDTWSLNLSSLVWRQHKSSVLPPVAGHTL
TVRRDSSMLLIGGYSPENGFNHHLLEFNIHSGNWTVAPHTGTPPTGLYGHSAVYHEQTDA
VYVFGGYRFHVETVEPSGELYSLYYPNLTWSLLVPSQGNKPLSRFFHAAALIKDTMVIVG
GRTGEEDYSNTVSLYQINCNTWIQPDSAVGEPVNRSVSLAMAGWGGRLFLSGGFNGVTLG
RLLTLTLPSDPCALLSMPEACNTTTGSCVWCRGTCASSNTAERLGCSIGQSPCSPTPRLP
DQCRRLKTCSECLARHPRTFSSPSQSQSALQCKWCTNCPEGACISSTVSCTSEHDCRINQ
REIFLSSNCTETSCEASDCPKCTASGKCMWTRQFKRTGETRRILSVNPTYDWTCFSYALL
NVSPMQVESSPPLPCPPPCYHLSTCSLCLGSRGSDGGWQHCVWSMALQQCVSPSFVPLRC
EAGQCGRLLSGGDSCSPQCAQLTQCSQCIAWPQCGWCAARGGNGAGRCQQGGLDGVSEGV
CPQRNSSWSFLHCPEEDECANGHHHCNSTQDCHDLTQGYHCTCKQGYVLSRVSGQCEPVC
AQGCVNGTCVSPGVCQCHFGFVGDNCSSQCRCNKHSNCKGVSETDKCLECRNNTMGDHCE
KCKPLYVGSAVGGGTCRPCREFCRGNSAVCLSRDEHKRAVDHPQDHPLDQDSIVQWVSEG
PTEDAAVCVSCQNNSVGDKCESCLSGYFLLQGKCDKCQCNGHADTCNEHDGTGCPCQNNT
ETSSCLSSPQSDRKDCYRTQCAKCKDSFNGTPVNGRQCYRQFNVDNECCFDPTSQTNCFH
DPTIRNLPKGRTVFFAAQPKFTNVDIRVTIDVTFGEVEVYVSNSHDTFIVEVDRHTGIHA
VKIEDESAARGGVSGGDKETPPSPMKVYANSSSSLGGPMLPNTPLQLHAKPQGADREVRE
ARTEGLISYITVWKPQTVLIVRGVRDRVVITFPHEVHSLKSSRFYIALRGVGTDERQGES
QGLLFLRQDQAHIDLFVFFSVFFSCFFLFLSVCVLLWKIKQFMDFRREQRRHIQEMTKMA
SRPFAKLTVYLEPEEPQLIYLPSTGGGGVGGSAVSLAHARTGKLGGIVVGQRGRAGAVSY
KHEPGSGPTVHHHHLTLGGGGNSGQHLPLHYLNTHHYVPTTANTTASHHHHPSSHSGYQH
FCRSDPFLSQLMGFSYSTFKVGPITLEPTDDGMAGVATVLIQLPGGILAPNRACLGSALV
TLRQNLQEYCGHGNGGGHPGAGGVRKGLLGHQHLTTMAM
NT seq
8760 nt
NT seq
+upstream
nt +downstream
nt
atggggacggagacacgggatctggtgagtatcacaaatgcatgggaaggttcccggctt
gtgagcaagataatcggacaaccccatcttcttcaccttctccacttattccaggtgggg
gagaggatggcctccctcctccatggccccctgctggggttgctgctggtgactgtggcc
cctgggtgttgggcaggagactgtaagggccacagacaggtgctgaggggccccccaggg
tacgtcacagatgggccagggaactactctgtaaacgggaactgcgagtggctcatcaaa
gcccccagcagcaattaccgtatcgtcctgaacttcaccttcatggagacagaatgcacc
tacgattacctgttcgtctacgatggagactcctaccagagccccctactggccagtctg
agtggcaccaccctgccgcagcccatagaagccaagtctggcaagatgctgctccacctc
ttcagcgatgccaactacaacctcctgggcttcaatgccacctactcgttctctgtgtgc
cctggagcctgcggaggtcacgggcgctgtgacacagcctcatccctgtgccagtgccac
ctgggctggggaggagccgactgcgccacccctctgtgtccccaggcctgcatcctgcat
ggcacctgtgacaagagaggagagcgttgtctctgcagctcggacttcctgggccagagc
tgtcagttgggtctccgtgatgacagtggggcggggcagtggtggcaggtgagcgggggc
gacccctacactcccccccggaccggctctgctggggtctacctgtcctccactggagcc
atgtacctgtttggagggtttgacttgaaccgagctctgggggacctggttaaatacaac
ttcagcatgaaccagtgggagaacagatcttatggacactccccagcggctcgtcactcc
cacacagcagttgagtggaaggggaacatggtgatcttcggaggagagctcgcgagcgcc
gctttagccagcgatgtctggatgtaccgcccaatccaggatgactggcagcagctcggc
caatcccatttgcacggggcaccgagagtggccaaccatgcagcagctgtagtggacaac
tatctctacatatttggaggtcgtacggaagaggacatgttctcgtcatcactgtatcgg
tttggtctgcggggttctggggtgtgggaagcggtgcagcccaccggtgggaagcccccc
gccacagcaggtcactccatggtgttccaccccccgtcccgggccctgctggtctacggg
ggccacaggcctaccaccgccaggttcagtgtacgtgtgaactccacggatgtattccac
gtggaccggaggttctggacctcgttccgctcccgtttcccagccacaggccccagggag
agagccttccactcagccaccgtcatcggcaactacatggtggtctatggggggaatgtg
cacatccactaccaggaggagaagtgttatgatgagggaatcttcttctaccacctgggc
tgtcaccagtgggtgtctgctggggagagcctccagcacagaggagaggctgtgagaggg
cggtactcccatgtagctgctgtgatggagggcagggtgctgctggttgccgggggatac
agtggtattgcccgtggagacctggtggcgtacaaagttcctctgtttgtgagcagtgac
ccaggagaccgggacgctgtgtgtgccgaggcaccagacgagagcgtgtgtctgaagaac
ccagaatgcagctggtgtgagggccgctgtcgggagtaccaacccaccaacccgtgtggc
agcacagggtgcctgggcctggcccgcttcctttctgactgccagtcctgcctggtgttc
agtggggctccaggttccctgccccgcgcccccggtgacttcggctggtgtgtccagaac
gagtcctgcctacctgtgtcagatcaaagtgcttgccgtgtggaccagatctcaggggcg
tacggctggtggggggagcgtacccgtttcctcacctcaatcctttcctgtcgcactgag
aactatgtcccgggactgcacctgctcaccttccagcacccccgcaacgactcccagcct
gacaaggtgtccatcctgcgcagcacctccatcatcctcagccccaccacagagatggac
gtcaccctgcagttccggggcttcatccaccccctgtggggtgcgcctccacctgcaccc
cctcccaccgagacagtctccatgtgggcccggatacagaggctacactttgaggcccgc
atggctgctggacccaattccctgcaactgaaggaggtggtaggtcgctgggcagctcac
caggagaaggagacgaagctgctgtcccgtcctgacatgggtcgtctgtttcccaacctg
acccgagggaaccgctacctggtccaggccgagggatacctcaacaactcaggctctgga
cagaccagtgagatggccctgacctggaacagaaccaccctgcccggcggaagtgagatt
tccttcttgttcttggagccgtaccgttctggctcttgctcggggtaccagtcgtgcttg
gcgtgtctgtcagaccagtcctgtggctggtgtccgtctctgggccgctgtctgttccgt
gccctgcctgacctggagccctgcccggaggaccagggggaaggggagcgccacctgctg
ctggccccgccgcaatgcaccctctgtgaggagtacagggactgctccgcctgcactcag
gacccctactgtgagtggcagataaactccagcaagaagggtgactaccaatgcagccga
cgggggagactggaaggatccattcgcgacccagtggggtgccctaaagtctgcaaccag
aggaggacatgtggggagtgtttgtctaactccagtcagtgtgcgtggtgtgagtcggcc
caagcctgcttctactttgcggcctacctcactaagtacccctacggagagtgcagggac
tggtatgacagtgtccactcagtgccccagtgtaagcagtgctcagctctggtcacctgt
acagactgtctccagacgttccagtgtggctggtgtggagactacaacaaccccaccatc
ggcaggtgtctaagaggagactgggcagggatggacgacccctctgtgtataactgcagt
gtggctgtggctgaagtacgggctaccagtcctgagccccagaccttggcccccccgcgg
cccatggagatggagctggagctggagcacctggaggagggggagagggatgcagtctgg
tcctaccccacctgtcccgatgtggaggagtgcaggctgggcctccacagctgccacccc
ttcgccacctgcgtcaacacccccacctcctacgagtgccactgtgagaggggctacact
ggggacggcaccctgcactgcaaccagacttgttataatgagtgtcgtgagggccagtgc
agcggcagcccgcggtttgagtgtgagtgttccctgggctggacatctgacccagccacc
ctggtgctgagcggggtggagtgtgacgtggactgtggctgtaacttccacagcacctgt
atcaccgccccaggcatctgtgaccactgccaggattggacaacgggtccccagtgtgag
cactgtcgaccagggagttttggttctgcgctggccgggggcgggggctgtgtgccctgc
cagtgcaacggccatggagaccccctccagggctactgccacaatcagacaggccaatgc
ttctgcacacaccacacccagggaccacactgtgaatcctgcctgcccggatactacgga
gaccccaggaataatggcacctgtttccgtcagtgtcaggggcgctctgtgatcctgtcc
caccagtcacccctctctgagctccccatctcgtcctccctggggtggcgagggggcgtc
ggggggaaggggggactctcccactgtctgtgggtcctgtctgtctctgagaacctggcc
ccctgtgtgccgggcgagctgtgccctcctgtggctctcaccctgcacccagactctcac
acacagtgcactagctcctacgtttacgtgtttgacggcctgcctcgtttcttgagcaac
ggggtggtgcactcagaccacaacctgattggagcgttctgtgggacgacccggactcag
ccaatcactgtggaggccacttcaggtgtgatctctgtctactttgaggccaacgtctcg
tccgaccaccctcagggtttcaacgcctccttctgggtgcgacgctgtcgagagggttct
gaggcaggcgaggatgggtcaccggtgtgccagggaggggcgcagtgcagtggggggctg
tgccagtgtcctcaggggtacggggggccgtactgcgacaggcccctctgtcccgaggac
tgtgggctagcagaggtccgaggctcctgcaacttgtctctgggagtgtgtgtgtgtgca
gacggttggggcggctcggactgctccactcctctggactccagtagcctagtttgggaa
accctactggacacacagctcacagcgaatcaggcccacaggttcctccaccggatgggc
cattctctagtgtctgggccccaggggaacctctggatgtatggaggcctctctctctca
gagggcatcctgggaaacgtctacaggtactctgtgttggagcggcgctggactcagatg
ctgaccagctcagtggaggaaggctccacccccagcccacgctaccaccatgcctctgcc
cttctggccagtcaccagcctctctccggcgcccagggagccactcacaacctcatgctg
gtggtgggcggtgtcacgcagaagggcgtcgccctggatacgtggagcctcaacctcagc
agtctggtgtggagacagcacaagagctcagtgctgccaccggtggcaggtcatactcta
acggtgcgtcgggactcctctatgctgctcatcggaggttactctccagagaacggcttc
aaccaccacctgctggagttcaacatccactctggcaactggaccgtcgccccccacacc
ggcacgcctcctacaggtctgtatggccactctgctgtgtaccacgagcagacggacgcc
gtgtacgtgttcggaggctaccgcttccacgtggagacagtggagccctcaggagagctc
tacagtctctactatcccaatctcacctggtccctactggtcccctcacaggggaataag
cccctgtctcgtttcttccacgctgcagccctgataaaagacaccatggtgatcgtggga
gggaggacaggagaggaggactacagcaacacagtgtctctgtaccagatcaactgtaac
acctggatacagccagactcggcggtgggtgagccagttaaccgttcagtgtctctggcc
atggcgggctggggtgggcggctgttcctctctgggggtttcaacggggtcaccctgggg
cgtcttctcaccctgacccttccctctgacccctgtgccctgctgtccatgcccgaggcc
tgcaacaccaccacaggcagctgtgtctggtgcaggggcacctgcgcctcctctaatacc
gctgagagactgggctgttcaattggtcagtctccctgctcccccacccctcgtctacca
gaccagtgtcgaagactgaagacctgcagcgagtgtctggcacgccaccccaggaccttc
tctagcccctcacagtcccagtctgctctgcagtgtaagtggtgtacaaactgtccagag
ggagcatgcatcagcagtactgtcagctgcacctcagaacatgactgcaggatcaaccag
agagagatcttcctgtccagcaactgtactgagaccagctgtgaggcctccgactgcccc
aagtgcaccgcctcagggaagtgcatgtggacacgccagttcaaacgcactggggagacc
aggcgcatcctgagtgtgaaccccacctacgactggacgtgcttcagctacgccctgctc
aacgtgtcccccatgcaggtggagtcctccccccctctgccctgcccgcccccctgttac
cacctcagcacctgcagcctctgcctgggctcccggggctcagatgggggctggcagcac
tgtgtgtggagcatggcactgcagcagtgtgtgagtccatccttcgtgcctctgcgctgt
gaggcgggtcagtgtggtcgtctgctgtctggtggggactcctgctccccacagtgcgcc
cagctcacccagtgctcccagtgcatcgcctggccccagtgtggctggtgtgctgcacgc
gggggcaatggggctggacgctgccagcagggaggcctcgacggtgtgagtgagggagtg
tgtccccagaggaacagcagctggtcattcctccactgcccggaggaagatgagtgtgcc
aacggccaccaccactgtaacagcacccaggactgccatgacctgacccagggataccac
tgcacctgcaagcagggctacgttctcagccgtgtgtcaggccagtgtgagccggtgtgt
gctcagggttgtgtcaacgggacgtgtgtgtccccgggagtgtgtcagtgtcactttggc
ttcgtgggggacaactgctcgtctcagtgtcgctgtaacaaacacagcaactgtaaagga
gtgtctgagactgacaagtgtctggagtgtagaaacaacaccatgggtgatcactgtgag
aagtgtaagcccctgtatgtggggtcggcggtgggtggggggacgtgccgcccctgtcgg
gagttctgcagggggaacagcgctgtgtgtctgtcccgggacgaacacaagagggcggta
gaccacccccaagaccaccctctggaccaagacagcattgttcagtgggtgtcggagggt
cctacagaggacgcagcggtttgtgtgagctgccagaacaacagcgtgggggacaagtgt
gagagctgccttagcggctacttcctactgcaggggaagtgtgacaagtgtcagtgtaac
ggccatgctgacacgtgtaatgaacatgacggcacaggctgcccctgtcagaacaacaca
gagacctcttcctgcctcagcagcccgcagagcgacaggaaggactgctacagaacacag
tgtgccaagtgcaaagactccttcaacggcacaccggtaaacgggcgccagtgctaccgg
cagttcaacgtggacaatgagtgctgcttcgaccccacctcccagacaaactgcttccac
gaccccaccatccgcaatctgcccaagggacgcaccgtcttcttcgctgcccagccaaag
ttcaccaacgtggacatccgggtcaccatcgacgtgaccttcggggaggtggaggtgtac
gtgtccaactcccacgacaccttcatcgtagaagtggaccgccacacaggcatccacgcc
gtcaagatcgaggacgagtcagcggcccgaggtggggtgagcgggggggataaggagacg
cctccatcacctatgaaggtgtatgccaactcctcatccagtctgggtgggcccatgctc
cccaacacccccctgcagctccacgccaagccccagggggcggacagggaggtacgggag
gccaggacggaggggctcatctcctacatcacggtgtggaagccccagacagtgctgatc
gttcgaggtgtccgtgaccgcgtggtcatcaccttcccccatgaggtccattccctgaag
tccagccgcttctacatcgccctgcgcggggtaggcaccgacgagagacagggcgagtcc
cagggcctgctcttcctccgccaggaccaggcccacatcgacctgttcgtcttcttctct
gttttcttctcctgcttcttcctcttcctctccgtctgcgtcctcctctggaagattaaa
cagttcatggacttccgccgagagcagaggcgtcatatccaggaaatgaccaagatggca
tccaggcccttcgccaagctcactgtctatttggagccagaggagccccagctcatctac
ctgccctccacagggggcggaggtgtggggggcagtgccgtgtccctggcccatgcacgc
acaggcaagctggggggcattgtagttggccagagggggagagctggagccgtctcctac
aaacacgagccaggctccggccccaccgtccaccaccaccaccttactctgggcggaggg
ggcaacagtgggcagcacctgcccctgcattacctcaacacccaccactatgtccccacc
accgccaacaccacggcctcgcaccaccaccacccgtcctcccacagcgggtaccagcac
ttctgccgctctgaccccttcctgtcccagctcatgggcttctcctactccaccttcaaa
gtgggacccatcaccctggagcccacggacgacggcatggccggggtggccaccgtcctc
atccagctgccggggggcatcctggcccctaaccgcgcctgcctggggtccgccctggtc
acactacggcagaacctccaggagtactgtggtcacggcaatggagggggacaccccgga
gcgggaggggtgcgcaaaggcctgctagggcatcagcacctcaccaccatggctatgtag
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