Coregonus clupeaformis (lake whitefish): 121542904
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Entry
121542904 CDS
T08357
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121542904 (tmc4)
03037 Cilium and associated proteins [BR:
cclu03037
]
121542904 (tmc4)
Transporters [BR:
cclu02000
]
Other transporters
Pores ion channels [TC:
1
]
121542904 (tmc4)
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121542904 (tmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
121542904
NCBI-ProteinID:
XP_045064360
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All DBs
Position
28:21183037..21189730
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AA seq
701 aa
AA seq
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MEFSELQRQSSTIAHGYHGAQQSVRLRSKSVVSNQNGPQFNWGSPPSEGGEEGDSGPPKD
LRERPMPMRLKRAIREVQQMRVPVVTSWQSWKRSKAKSLSRFRADAGGAMSYIALWRKAL
HKIGGHFGGGVQSYFMFLRFLVVLNFLSFLLIAGFIFIPSIVFRSTSNSNMTVDSTGPEA
CRVYDPNLQGLVVFYQYFLDLLSGTGFMEYSYMFYGYYNNTVAESSGFHYNLPLAYLLTT
VFYFAFCLICIIARMGSALRIAVATGSGAAGSYSKMVFTGWDYGCQGYRATKLKQKSIHY
QLQVDLEEERLQKKALSLTLGQTVGLCSLRIFLMLVSLALIGGAFFGIFQATVFSQAKVG
AEGILGLFWVYLPSIVITTGNFVVPFMCDQIALFERYSPSTTIIMALFRSVFLRMISLGV
LLFTLWSQITCFKESKDCQLCQYNNKEYPCWETRVGQEMYKLALFDFLITIAMLILVEFP
RRLFVDHCSCALTRWVGRQEFLVPPNVLGLVYGQTVVWTGALFCPLLPLINTLKFFILFY
CKKVTLFSNCRPAVKTFRSTTSTIFFLVVLLFGWGLALVAMIYSLAQIHPSMSCGPFRSL
TMMWSIVPNTFYTLSLTTQDFIFYMGSQAFSIPLFIFSCVVLCYVAALAAVYGKSVDLLK
AQLKLEGRDKQFLVKQIEELSIEMGVPTRAQADTFDTGAAN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggagttcagtgagctacaaagacagagctccactatagcccacggttaccatggtgcc
cagcagtcggtgaggttacggagtaagtcggtagtgtccaatcagaatggccctcagttc
aactggggttctcccccctcagaggggggagaggagggtgactcgggaccccctaaggac
ctcagagagcggcctatgcccatgcgcctgaagagagcgatacgggaggtgcagcagatg
cgtgtgcctgtggtgactagctggcagtcgtggaaacggagcaaggccaagtccctgagc
aggttcagagcagatgcagggggagccatgtcctacatagctctgtggagaaaggctctg
cataagataggaggccactttggcggtggtgtccagtcctacttcatgttcctgcgcttc
ctggtggtgctcaacttcctgtcattcttgctgatcgctgggttcatcttcatccccagc
atcgtgttcagatccaccagcaacagtaacatgacagtggacagcactggtccagaggca
tgtagggtctatgatccaaatcttcaaggtctggtggtgttctaccagtacttcctggac
ttactctctggaacgggtttcatggagtactcctacatgttctatggttactataacaac
accgtggcagagagcagtggcttccactacaacctgcccctggcctacctcctcaccacc
gtcttctacttcgccttctgtctcatctgcatcatcgcacgcatggggagcgcacttcgc
attgccgtggcaacaggcagtggcgctgccggcagttacagcaagatggtgttcactggc
tgggactacggttgccagggataccgggccaccaaactcaaacagaaaagcatccactac
cagctacaggtggacctggaggaggagaggctacagaaaaaggctttgtctctaacatta
ggtcagacagtgggtctgtgttctctacgcatcttcctcatgctcgtctccctcgccctc
ataggaggagctttctttggcatcttccaggctactgtcttcagccaggcaaaggttgga
gcagagggcattctgggcctgttctgggtttaccttccttccatcgtcatcacaacagga
aactttgttgtgcccttcatgtgtgaccagatagccctgtttgagagatattctcctagt
accaccatcatcatggcactgttcaggtcagtgtttctgcgtatgataagtctgggagtg
ctgctgtttactctgtggagtcagatcacctgctttaaagagagtaaagactgtcagctc
tgccagtacaacaacaaggaatatccgtgctgggagacgcgtgtgggacaggagatgtac
aaactggccttgtttgacttcctcattaccatcgccatgctcattctggtggagtttcca
cgcaggttgtttgtggaccactgctcctgtgcactgacccggtgggtaggtcgtcaggag
ttcttggtgcctcccaatgtgctgggtctggtctatggtcagacagtggtgtggaccgga
gctctgttctgccctctgctgcctctcatcaacacactcaagttcttcatcctcttctac
tgcaagaaggtcactctgttttctaactgtcgtccggcggtgaagacgttccgctccacc
acctccaccatcttcttcctggtggtgttgctgttcggctggggcctcgccctcgtcgcc
atgatatacagtctggcccagatccatccctctatgagctgtggtccgttccgctcactc
actatgatgtggagtatcgttcccaacaccttctacactctctccctgacaacacaggac
ttcatcttctacatgggctcccaggccttctccatccccctcttcattttctcctgtgtg
gtgctgtgttacgtagcagctctagctgcagtctatgggaagagtgttgatctgctaaag
gcccagcttaaactggagggacgtgataagcagttcctggtcaagcagattgaagagctg
agtatagagatgggggttccaacaagggcccaggcggacacctttgacactggtgcagca
aactga
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