Coregonus clupeaformis (lake whitefish): 121542913
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Entry
121542913 CDS
T08357
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121542913
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121542913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_HPS5
eIF2A
MIOS_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Voldacs
Motif
Other DBs
NCBI-GeneID:
121542913
NCBI-ProteinID:
XP_041708463
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MSAPGEDTLPNEDGKMEEMEGGGSDEDEMEEEGKDGEQQTQVYVPGIQPLQPGEELEMDR
SAYRMYHECQTGAPCLSFDVLRDANGDGREQYPLSMLLCAGTQADAALSNRLLVIRMHNL
HGTTEKEKEGDESSDGESDEEDDDEDKKPQMELAMMPHYGGINRVRVTHRGDQSLAAVWS
EKGQVEIFDLRSQMEAVHSSAAMSSFVKQQKEATPLFSFSGHMTEGFAIDWSPKVPGRLV
SGDCKKNIHVWEPREGGTSWQIDQRPFSSHTKSVEDLQWSPTEATVFASCSVDQSIRVWD
TRAPPNSMLCANEAHSSDVNVISWNRIEPFILSGGDDGLLKVWDLRQFQSGRPVANFKQH
SAPVTSVEWNPVDSSVFAASGADDVVSQWDLSVESCDVGARSEGVKDLPPQLLFLHQGQT
EVKEIHWHPQIPGMMVSTALSGFNVFRTISV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcccggagaagacacacttccgaacgaagatggcaagatggaggagatggaa
gggggtggcagcgacgaagacgaaatggaagaagagggaaaggatggagaacagcaaact
caagtttatgtccccggtatacagcctctccaacccggagaggagcttgagatggaccgg
tcggcttaccgcatgtaccacgagtgtcagacaggtgctccttgcctgagcttcgacgtg
ttgagagatgcgaatggagacggcagggagcagtatcccctctctatgctgctctgtgca
ggcacacaggccgacgctgccctcagcaacaggctgcttgtcatacgcatgcacaacctc
cacggtactacggagaaggagaaggagggggacgagagtagtgatggagagagtgatgaa
gaggatgatgatgaagataagaagccacagatggagctggccatgatgcctcactacgga
ggtatcaacagagtccgagtgacccatcggggagatcagtcattggctgctgtctggtca
gagaaaggtcaggtggagatatttgacctccgatcccagatggaagccgtccacagttca
gctgccatgtcatccttcgtcaaacagcagaaggaagccacgcccctcttcagtttctcg
ggtcacatgacggagggctttgccattgactggtcgcccaaagtacctggtcggctggtc
agtggcgactgcaaaaagaacatccacgtgtgggaaccacgagagggagggacttcctgg
cagatcgaccaacggcctttcagttctcacaccaagtcagtggaggacctgcagtggtca
cccacagaagccacggtttttgcgtcctgctctgtggatcagtccatccgggtctgggac
accagagccccgcccaactccatgctctgtgccaatgaggcacactcctcagacgtcaac
gtcatcagttggaacaggattgaaccattcatcctgtccggcggggacgacggactcctg
aaagtttgggacttgaggcagttccagtcgggccggccggtggctaacttcaagcagcac
agcgcgccagtgacatcagtagaatggaaccctgtggactccagcgtgtttgccgcctct
ggagcggacgacgtggtcagccaatgggacctgtcagtggagtcatgcgatgtgggtgcg
aggtcggagggggtgaaggacctgccccctcagctgctgttcctgcaccagggtcagaca
gaggtcaaggagatccactggcacccgcagatacccgggatgatggtctctactgctctg
tcaggcttcaacgtgttcaggaccatctctgtatag
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