KEGG   Coregonus clupeaformis (lake whitefish): 121542941
Entry
121542941         CDS       T08357                                 
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04068  FoxO signaling pathway
cclu04136  Autophagy - other
cclu04140  Autophagy - animal
cclu04621  NOD-like receptor signaling pathway
cclu04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    121542941
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    121542941
   04136 Autophagy - other
    121542941
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121542941
   04121 Ubiquitin system [BR:cclu04121]
    121542941
   03029 Mitochondrial biogenesis [BR:cclu03029]
    121542941
Membrane trafficking [BR:cclu04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    121542941
Ubiquitin system [BR:cclu04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   121542941
Mitochondrial biogenesis [BR:cclu03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    121542941
SSDB
Motif
Pfam: APG12 ATG8 XendoU
Other DBs
NCBI-GeneID: 121542941
NCBI-ProteinID: XP_041708516
LinkDB
Position
17:69914905..69918264
AA seq 120 aa
MSDNAESPTETQKDEPSTPQQPTEDSGTADEKKKIDVLLKAVGDTPIMKTKKWSVEKGRT
VQSLSQFISRFLKMEANEQLFIYVNQSFSPSPDQEVGVLFECFGSDGKLVLHYCKSQAWG
NT seq 363 nt   +upstreamnt  +downstreamnt
atgtctgacaatgctgagtcgcctacagaaacgcaaaaagatgagccttcaaccccacaa
cagcctacggaagactcggggacggcagacgagaagaaaaaaattgatgtgttgttgaag
gcagtaggagacacccccatcatgaagacgaagaaatggtcggtagagaaagggaggaca
gtgcaatcgctctctcagttcatctctcgattcctcaagatggaggccaatgaacagctg
ttcatttacgtcaaccagtcattctctccctcgcctgatcaggaagtaggagtcctgttt
gaatgttttggcagcgatgggaagctggttctacattactgtaaatctcaagcctggggt
taa

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