Coregonus clupeaformis (lake whitefish): 121542955
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Entry
121542955 CDS
T08357
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121542955
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
121542955
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121542955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
121542955
NCBI-ProteinID:
XP_041708543
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MGRKLDPTTYVKKGPGRKSRKQKGAETELAKFLTDEDTAPKRLSSRSRKRAGKRAQVTKK
PKETIEKEEPKKGFTDENSEWLKPAKRKREVGQSDDEDDSDSQWEQEEDEGQEGGEKNKG
KKLLIEGDDDDDEDLVDDYGALEDNSEGEGEGDSDGEELLPIERAARKQKKLQEAMGQES
DDDDDDDDDDKGKSGDEDMDEDDTVQANIDEMDKFILPGAEEIAKEGVLLVDLQTIHQRI
KDNVDVLSHFATKREEGKERTEYLSLLKKDLSTYYSYNNFLIDKLLDIFPVSELIDFLEA
NEIQRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGATPEYLA
GHYMLQGASSFLPVMALSPQEGETVLDMSSAPGGKTTYMAQLMRNTGVIVANDASADRLK
SVVGNIHRLGVTNSVICNYDGRQFPKVMGGFDRVLLDAPCSGTGVIAKDPAVKTSKDESD
IQRSAHLQKELILAAIDSVNAESPSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVQTG
LDFGKEGFTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTVPTTAVDKDGEEE
TEPSEAVEVTADSSDEDGPSKAGSKNKSKKQKPVPGKPAVSQKAIANGKPAKSIVKKTTN
PSTLKKSQKPTGPKKAKIAKMDGETVKVDGELKKSNTVKTEGETTKESKEGSRFEKKGDK
QRKSPMQSKKRIGKNKFNKLKKLLKKEEVGQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatcccaccacttatgtgaagaaggggccggggcggaagtccagg
aagcagaaaggagcagagactgagctggccaagttcttaacggatgaggatactgcacca
aaacgactgtcaagcaggtccaggaaaagagctgggaagcgagctcaggtgaccaaaaag
cccaaggaaaccattgagaaggaggagccaaaaaaaggattcacagatgaaaacagtgaa
tggctgaagccagcaaagaggaagcgtgaggtcggccaatcagatgacgaggatgacagt
gacagccaatgggagcaggaagaggacgagggacaagagggaggggagaagaataaaggg
aaaaaactactaattgagggagatgatgatgatgatgaagacctggttgatgactacggt
gcattggaggacaacagtgaaggagagggggaaggagacagtgatggagaggagctgctc
cccattgagcgagctgccaggaagcagaagaagctgcaggaagccatgggccaggagagt
gatgacgatgatgatgatgatgatgatgataaggggaagagtggagatgaagacatggat
gaagatgacacggtacaggctaatatagatgagatggacaaattcatactacctggagca
gaggagatagcaaaagagggcgttttgcttgtagacctgcagaccatccaccagagaata
aaggacaacgtggacgttctgtctcactttgccaccaagagggaggaggggaaagagaga
acagagtacctctctctcctgaaaaaggatctttccacttactacagctacaacaatttc
ctcatagacaaactgctggatatctttccagtgtcagagctgattgatttcctggaggcc
aatgaaattcagcgacctgtcaccattcggaccaatacactgaagacaaggaggagggac
ttggctcaggccctgatcaacagaggggtgaatctggatcctctggggaagtggtctaaa
gtgggcctggtcatcttcgactcctcagtacccataggtgcgaccccggagtacctggct
ggtcactacatgctgcagggagcctctagtttcctgcctgtcatggctctctctccccag
gagggggagacggtgctcgacatgagctcagctccagggggaaagaccacctatatggcc
cagttgatgaggaacacaggggtgattgtggccaatgatgccagtgctgacagactgaag
agtgtggtgggcaacatccaccgtctgggagtcaccaactcagtgatttgtaactacgat
ggcaggcagttccctaaggtcatgggtgggtttgacagagtgctgcttgatgctccctgc
tcaggcacaggagtaatcgccaaagaccctgctgttaagaccagtaaggacgagtctgac
atccagcggtcggcccacctgcagaaggagctcatcctggcggccatcgactctgtcaac
gctgagtctccctctggaggctatctggtgtactgcacatgctctatcatggtggaggag
aacgagtgggtagtggactatgctctcaagaaaagaaacgtcaaactcgtccagactgga
ctggactttggcaaagaaggcttcaccagattcaaagagagacgattccatccctctctg
aaactctcacgccggttctaccctcattcccacaacatggacggtttctttgtggccaag
ctgaaaaagttctccaacacagtcccaaccacagcagttgacaaagacggagaagaggaa
accgagccatctgaggcagtagaggttacagctgattcctctgatgaggacggaccatct
aaagcaggttctaagaacaagtccaagaagcagaagccagtccctggcaagccagctgtg
tcacagaaggcaatagccaacgggaaaccagccaaaagcatcgtcaagaaaacaacaaac
ccaagcaccctgaaaaaaagtcaaaaaccaaccgggccgaagaaagcaaagatcgcaaag
atggatggtgagactgtgaaagtggacggagagctcaagaagtccaacacagtcaaaaca
gaaggggagacgaccaaagagtcaaaggaagggagcaggtttgagaaaaagggcgataaa
cagaggaaatcccccatgcagagcaagaagagaattgggaagaacaaattcaataagttg
aagaagctgctgaaaaaagaagaggttggacaatga
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