Coregonus clupeaformis (lake whitefish): 121542993
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Entry
121542993 CDS
T08357
Symbol
emg1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121542993 (emg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121542993 (emg1)
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
121542993 (emg1)
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
90S particles
Other 90S particles
121542993 (emg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
121542993
NCBI-ProteinID:
XP_041708597
LinkDB
All DBs
Position
Unknown
AA seq
238 aa
AA seq
DB search
MEAHSGDKRGLEHLDEYEPKPAKHMRSLHDRMAERRLVVILEGATLETVKVGKTFELLNC
DQHKGMIIKSGRDPGKIRPDITHQCLLMLMDSPLNRAGLLQVYIHTERNALIEINPQTRI
PRTFNRFCGLMVQLLHKLSVRAADGPQRLLKLIKNPVSDHLPPGCPRICTSFSSGEAVGA
RTVVPEEGPAAVVVGAFAHGAVNVDYTEKTVSISNYPLSAALTCAKMCSAFEEVWGVL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccacagcggtgacaagcgtggtcttgaacatttagacgaatatgaacccaaa
ccagcaaaacatatgcgtagcctgcacgatcgcatggcggaaaggcgactagtagttatt
ttagagggggcaacgctggaaacagtgaaggttggcaagacatttgagctgctaaactgt
gaccaacacaagggcatgataattaaaagtggacgggaccctgggaagattcgacctgac
attacacatcagtgtttgttgatgctgatggacagtccattgaacagggcaggcctcctg
caggtttacatccacacagaaaggaacgccctgattgagatcaacccacagacacgcatc
ccccgaaccttcaaccgcttctgtggcctcatggtccagctcctgcacaagctgagtgtg
agggcggctgacggcccccagcgcctgctgaagctcatcaaaaaccctgtgtcagaccac
ctgccccctggctgcccccgtatctgtacctccttctcctctggggaggcagtgggcgcc
cgcaccgtggtaccagaggaggggcccgccgctgtggtggtcggagcgttcgcacacgga
gcggtgaatgtggactatacagagaagactgtgtccatcagtaactaccctctctctgct
gccctcacctgtgccaagatgtgctctgcctttgaggaggtctggggcgtgttgtga
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integrated database retrieval system
