Coregonus clupeaformis (lake whitefish): 121543017
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Entry
121543017 CDS
T08357
Name
(RefSeq) sodium- and chloride-dependent transporter XTRP3-like
KO
K05048
solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121543017
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121543017
BRITE hierarchy
Motif
Pfam:
SNF
SLT
Motif
Other DBs
NCBI-GeneID:
121543017
NCBI-ProteinID:
XP_041708623
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All DBs
Position
28:complement(18443888..18464994)
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AA seq
600 aa
AA seq
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MGKDDARAEWDNPMQFVLACISYAVGLGNVWRFPYLCQMHGGGGFLIPYMLMLVLLGVPL
FYMELAIGQKMRLGSIGAWRAISPYLGGVGLASVVTSMYLCLYYNVINAWSFWYLFHSFQ
SVLPWAECPINSNLTGPVEECERATPTQYFFYRETLDISGSIEENGGIHMGQALCLLLAW
MIVYLFIVKGVKSTGKVVYFTATFPYLVLIIYLIRGVTLHGAINGVKYMFTPKMEQLANP
TTWINAATQIFFSLGLGFGSLIAFASYNQYNNNFEKQAIVVSIVNSGTSIFASIVTFSIY
GFKATFNYESCLERMRLLLLNTFDLAEDTISLENVNHWIAELNSTHPEQFASLGGRLETC
DLEAELDTAVEGTGLAFIVYSEAIKNMPVSQLWSVLYFIMLLLLGMGSMLGNVIAVITPL
SDLKFINRYMSTKTLNGLVCLFCLLLGLGFTTRSGNYWFTMFNDYGATFSLLFIVLIEVI
TVCYIYGIKRFEKDVEDMLGHRLNWYWKIMLAGVSPILLIALFIFYIINYIQGGTPTYQA
WNKELGKSVVTEYPPYAQAFIGLLLASSVCCIPLTALYAYCKKRNLASGKRERTVSTVSA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggacgacgcaagagcagagtgggacaatcccatgcaatttgtcctggcgtgt
atatcatacgcggttggactgggaaatgtgtggcgttttccatacttgtgtcaaatgcat
ggcgggggtggcttcctgatcccatacatgctcatgctggtcctgttgggtgtacccttg
ttctacatggagttagccattggccagaagatgcgtctgggcagcattggagcatggaga
gctattagcccctatctggggggagtgggtctggccagtgttgtgacctccatgtaccta
tgcctctattacaatgtcatcaatgcatggagtttctggtacctcttccattcattccag
tcggtcctgccatgggcagagtgcccgattaacagcaacctgaccggccctgtggaggaa
tgtgagcgggccacgcccacccagtacttcttctacagagagaccctggacatttccggg
tccatcgaggagaatggagggatccacatgggacaggcgctctgcctcctgctggcctgg
atgattgtctacctgttcatcgtcaagggggtcaagtccaccgggaaggtggtgtacttc
acagccaccttcccctacctggtcctcatcatctacctcatccgtggggtcacccttcac
ggagccatcaacggtgtcaagtacatgttcacgcctaagatggaacagctggccaacccc
actacgtggatcaacgcggccactcagatcttcttctctctgggcctgggctttggatcc
ctcatcgcctttgccagctacaaccagtacaacaacaactttgagaagcaggccatcgtc
gtgtccatagtcaacagtggcacctccatcttcgccagtatcgtcactttctccatctat
ggcttcaaggccaccttcaactacgagagctgcctggagaggatgcgactgctgctcctg
aacacctttgatctagcagaggacaccatcagtctggagaatgtcaaccactggatcgct
gagctgaacagcacacacccagaacagtttgctagtctgggaggtaggctggagacctgt
gacctagaggctgaactagacacggctgtcgagggtacaggcctggccttcatagtgtac
agtgaggccattaagaacatgcccgtgtctcagctgtggtctgtgctctacttcatcatg
ctcctgctgctgggcatgggcagtatgctgggcaacgtcatcgccgtcatcacccccctc
agtgacttgaagttcatcaaccgctacatgagcaccaaaacactcaatggtctggtgtgt
ctgttctgcctgctgcttggcctgggcttcaccacccgatctgggaactactggttcacc
atgttcaacgactatggagccaccttctctctgctcttcatcgtcctcatcgaagttatc
accgtctgctacatatatggcatcaaaaggtttgagaaggatgtagaagacatgttaggt
catcgtcttaactggtactggaagatcatgttggcaggagtcagtcccatccttctcatc
gcactattcatcttctacataatcaactatatccagggaggaacgcccacataccaggcc
tggaacaaagaactggggaagtctgtggtgacggagtatcctccctacgcccaagccttc
atcggcctcctcctagcctcctctgtctgctgtatccctctgacggccctctacgcctac
tgtaagaagaggaacctggccagtgggaagagagagcgcactgtcagcactgtgtcagcg
taa
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