Coregonus clupeaformis (lake whitefish): 121543021
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Entry
121543021 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase znrf2-like
KO
K10694
E3 ubiquitin-protein ligase ZNRF1/2 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121543021
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121543021
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121543021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_16
zf-RING-like
zf-rbx1
PRP21_like_P
RNF220
RINGv
Motif
Other DBs
NCBI-GeneID:
121543021
NCBI-ProteinID:
XP_041708628
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All DBs
Position
28:complement(16059665..16154064)
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AA seq
223 aa
AA seq
DB search
MGAKQSSPAANGRTRAYSGSDLPSSTSTTSNGNGRTAAMGMSYHAYGPSAHGASGTTATS
SQHIGPRTRSVGGSSGGSGTRPQSGINIPNSSGAYSSQESGSSTPEEAERDRSSGGQGGP
RLLIGSLPAHLSPNLFGGFKCPVCSKFVSTDEMDLHLVMCLTKPRVTYNEDVLSKDAGEC
AICLEELLQGDTIARLPCLCIYHKGCIDEWFEVNRSCPEHPSD
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgggggctaagcagagcagcccagccgctaacggacggaccagggcttactcgggctcg
gatctaccttcgagcacctctactaccagcaatgggaacggtaggactgcagccatggga
atgagctatcacgcgtacggcccgtcggctcacggggcctcgggaaccacagcgacctcc
agccaacacattggccccaggacgaggtccgtgggaggcagttctggagggtcagggaca
agaccccagtcaggcatcaacatccccaacagcagtggagcctacagctcgcaggagtct
ggcagcagcaccccggaggaggcagaaagggacaggtccagcggggggcaagggggaccc
cggttgttgattggatcgttaccagcacacctttcgcctaacctctttggaggcttcaag
tgccctgtctgttccaagtttgtctccactgatgagatggacctacacctcgtcatgtgc
ttgaccaaacccagagtgacgtataacgaggacgtcctgagtaaggatgcaggtgaatgt
gcaatctgcctagaggagctgctacagggggacaccattgctcgcctgccctgtctctgc
atataccacaaaggctgtattgatgagtggtttgaggtgaacagatcgtgtccagaacat
ccctcagactaa
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