Coregonus clupeaformis (lake whitefish): 121543033
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Entry
121543033 CDS
T08357
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121543033
Enzymes [BR:
cclu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121543033
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
121543033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
121543033
NCBI-ProteinID:
XP_041708650
LinkDB
All DBs
Position
28:complement(17321374..17481699)
Genome browser
AA seq
2212 aa
AA seq
DB search
MSPPRLTGALRSFSTVSKHEDFTEEVYDLKTKRLKRQELFSREGLTWQKIVQFFTQHLEK
AEQQAAAQELKSILQAAKQIVGTEHGQDTIESAAVFLFETFHNKDHVGHEETRAIKQMFG
PFPSSAADASCAAVSRAVAPLGESQVEEFVRSQSACRTPQRGSAFGRNITFSYDCYALDP
QEALPWAGGPEDETPGGGLDFHSFLNNHQGRRGNGGEVDGGRLSPGGAQSSGDGTILRGE
VEKYLNGGNMISSSPEELCTSLFEMLASTKSDDELQNELFELLGPEGFEMISVLLQKRSS
IVDSLLSIPADRINYPPDGSRKGSGGEGSSKPTYGCQVTIQSGKEKEMMKLHRREEKRER
KRGERRWDDTESSSDLYFDPKEMRAQREQALLTARRSPVLSRERVYERIRYPNVYDCYAE
ATKTSAFVGGAKLMLPDGIKRENNKMYEEVEIPPSDPMPISFEEKPIYISELDEVGQLVF
KGMQRLNRIQSIVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIKKDE
FKIVYVAPMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDV
VTRKSVGDVALSQIVKLLILDEVHLLHEDRGPVLECLVARTLRQVESSQSMIRILGLSAT
LPNYLDVASFLHVNPYIGLFYFDSRFRPVPLGQSFVGIKTTNKIQQLHDMEEVCYDKVLE
QIRNGHQVMVFVHARNATVRTAMGLIEMAKNRGESSFFQPDHGPDYGQCEKSIQRSRNKQ
MKEMFPDGFGIHHAGMLRADRSLMESMFSRGYLKVLCCTATLAWGVNLPAHAVIIKGTQI
YDAKRGTLVDLGILDVMQIFGRAGRPQFDKYGEGTIITAHDKLSHYLTLLTQQNPIESQF
LETMADNLNAEVSLGTVTNVEEAVRWLSYTYLYIRMRANPLAYGINHKAYQMDPGLELYR
KELVVMAARKLDKARMIRFEERTGYFASTDLGRTASHFYIKYNTMETFNELFDSQKTEAD
ILSIVSKAEEFEQVKVRDEEMEELEQMLCNYCELPAAGGVENGYGKINILLQTYIGRGEV
DSFSLISDLSYVAQNAARIVRALFEIALRKRWPAMTYRLLNLCKVIDKRLWGFAHPLRQF
SILPHNVLARLEEKKLTVDKLKDMQKDEIGHMLHHVNIGLKVKQCVHQIPSILMEATIQP
ITRTVLRVRLQITPDFKWHDQCHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVVSGEP
QQVVFTIPIFEPMPSQYYIRAVSDRWLGSEAVCIINFQHLILPERHPPHTELLDLQPLPI
TALGNTEYENLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAELAMFRVFNQY
PTSKVVYIAPLKALVRERIEDWKVRIEEKLGKKVVELTGDVTPDMRAIAAADLIVTTPEK
WDGVSRSWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTKKTVRVVGLS
TALANARDLADWLGIGQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPVFQAIR
SHSPAKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDETQMTDIIATVRESNLKL
TLAFGIGMHHAGLHERDRKTVEELFVNCKIQILIATSTLAWGVNFPAHLVIVKGTEYYDG
KTRRYVDYPITDVLQMMGRAGRPQYDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLMGV
LSDHLNAEIAAGTITSKQDAMDYITWTYFFRRLVMNPSYYSLDDISHETVNKYLSNLVER
SLRDLECSYCMEIGEDDCTIEPLTYGRISSYYYLKHQTVRMFKERLRAELPIQDILSVLT
DAEEYGELPVRHNEDQLNSELAQRLPLQVNPHSYDSAHTKTHLLLQAHFSRAQLPCSDYG
TDTKTVLDNAIRICQAMLDVAANEGWLVTALSICNLVQMIVQGRWLNDSSILTLPTIEQQ
HLYLFSRWSSKGGRGGARGFHGPIEGLPELIATCEGRENTFAAIVGEALQPHQISQAWSF
LSHLPVMEVRLSVKGWWEGCGEQTERPLPAAGGKLRDDKSWLDVHADQEYVLQVSLQRIN
TGQQRRKQDSKAQAPRFPKNKDEGWFLVLGEVERRELLAVKRIGYCRHRSTVSLAFYTPE
KTGKCIYTLYLMSDSYLGLDQQYDLHLNVTPACIAAQVNSEVTEAMGGMSFK
NT seq
6639 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaccccggctcaccggcgccctgcgctccttctctactgtgagcaagcacgaa
gacttcactgaagaagtatatgatctgaagaccaagcgtctaaagaggcaggagctgttc
tccagagagggcctgacatggcagaagatagtccagttcttcactcagcatctggagaag
gcagagcagcaggctgcagcacaggagctgaagagcatcctacaggctgccaaacagata
gtggggacagagcatggccaggacaccattgagagtgctgctgtcttcctgtttgagact
ttccacaacaaggaccatgtgggtcatgaggagaccagggccattaagcagatgttcggc
ccattcccctcctcggcagccgacgcctcctgtgctgctgtgtcccgggccgtggcccct
ctgggagagtcccaggtggaggagtttgttcgttcccagagcgcctgtcgcacccctcag
cgcggctcggccttcggacgcaacatcaccttctcctatgactgctacgccctggacccc
caggaggccctgccatgggccgggggccctgaggatgagacccctggtggaggcctggac
ttccacagcttcctcaacaaccaccaaggccgcaggggtaatgggggagaggtggatgga
ggcaggctaagcccgggaggggctcagagctctggggatgggaccatcctgaggggggag
gtagagaagtacctgaacggaggcaacatgatttcttccagccctgaggaactgtgcacc
tccctgtttgagatgctggcttccaccaagagtgacgacgagctgcagaacgagctgttt
gagctgctgggcccagagggatttgagatgatctctgttctcctccagaaaaggtcttcc
atcgtggactctctcctctccatccctgcagacaggatcaactacccaccagatggtagt
cgtaaaggaagtggaggagaggggagcagcaagcccacgtacggctgtcaggtgactatc
cagtcagggaaggagaaagaaatgatgaagctccaccggagagaggagaagagggagagg
aagaggggggagagacgctgggacgacaccgaatcctcctccgacctctactttgacccc
aaggagatgagagctcagagagagcaggccctgctaacagcacggcggtctccagtgctg
agcagagagagggtgtacgaacgcatccgataccccaacgtctatgactgctacgccgag
gccaccaagacctccgcctttgtagggggagccaagctgatgttaccagacgggataaag
agggagaacaataagatgtatgaagaggtggagattcctcctagtgatcccatgcccatc
agctttgaggagaaacccatctacatctctgaactggacgaggttggtcagttggtgttt
aaggggatgcagcgtctgaacaggatccagtccatagtgtttgagacagcctacaacacc
aatgagaacctgctcatctgtgcccccaccggggccggcaagaccaacatcgccatgctc
acagtcctccatgagatcagacagcacctccaacctggaggggtcatcaagaaggacgag
ttcaagatagtgtatgtagctcctatgaaggccctggcagcagagatgactaattacttc
agtaagcgtttggagccactgggcattgctgtcaaagagctcactggagacatgcagcta
accaaaggggagatcctgcgtacacagatgctggtgactacccctgagaagtgggacgta
gtgacaaggaagagcgttggggacgtggccctgtcccagattgtaaagctcctcatcctg
gacgaggtgcatctactacacgaggacagaggaccagttctggagtgcctggtggccagg
acactacgacaggtggagtcgagccagagtatgatccgtatcctgggtctgtcggccaca
ctgcccaactacctggacgtggcctccttcctccacgtcaacccctacatcgggctcttc
tacttcgacagccgcttcagacccgtgcccctcggacagagctttgtcggcatcaagacc
accaacaagattcagcagcttcatgacatggaggaggtttgctatgacaaggttctggag
cagatcagaaatggacatcaggtgatggtgtttgtccatgctcggaacgccacggtgagg
acagccatggggctgatcgagatggccaagaaccgtggagagtcttccttcttccagcca
gaccatggacctgactacggccagtgtgagaaatcgatccaacgttccaggaacaagcag
atgaaggagatgttcccagatggttttgggatccaccacgctgggatgctgcgtgctgac
cgtagcctgatggagagcatgttctccaggggttacctcaaggttctgtgctgtaccgcc
acactggcctggggagtcaacctgcctgcacacgctgtcatcatcaagggcactcaaatc
tacgatgctaagcgtggtaccctggtggacctgggcatcctggacgtgatgcagatcttc
gggcgtgccgggcggccccagttcgacaagtacggcgagggcaccatcatcacggcacat
gacaagctgagccactacctcaccctgctcacccagcagaaccccatagagagccagttc
ctagagaccatggctgacaacctcaacgctgaggtgtcactagggactgtgactaacgtg
gaggaggcagtgagatggctgagttacacctacctgtacatccgcatgagagccaacccg
ctggcctacgggatcaaccacaaggcctaccagatggacccaggtctggagctgtaccgt
aaggagctggtggtgatggcagccaggaagctggacaaggccaggatgatccgctttgag
gagaggacaggatacttcgcctccactgacctgggcagaaccgccagtcatttctacatc
aaatacaacaccatggagacgttcaacgagctgttcgactcccagaagacagaggctgac
atcctcagcatcgtctccaaggctgaggagtttgaacaggtcaaggtgcgtgatgaggag
atggaggagctagagcagatgctgtgtaactactgtgagctgcctgctgcaggcggagtg
gagaacggatacggcaagatcaacatcctactgcagacctacatcggacggggagaggtg
gacagcttctccctcatctcagacctgtcctacgtagcacagaacgcagctcgtatcgtc
agggctctgtttgagattgctctgaggaagcgctggcctgccatgacctaccggctgctc
aacctgtgtaaagtgatagacaagcgtctgtggggcttcgctcaccccctgagacagttc
tccatcctgcctcacaacgtactggctcgtctggaggagaagaaactcactgtggacaaa
ctgaaagacatgcagaaggacgagataggtcacatgctccatcacgtgaacatcgggttg
aaggtgaagcagtgtgtccaccagatcccttccatactgatggaggccaccatccaacca
atcacacgcaccgtgctcagggtccgcctccagatcacccccgacttcaagtggcacgac
cagtgtcatggttcagtgggagagccctggtggctgtgggtggaggaccccatcaacgat
cacatctaccactcagagtacttcctcctacagaagaaacaggtggtgagtggggagccc
caacaggtggtgttcaccatccccatctttgaacccatgccctcccagtactacatcaga
gctgtgtcagaccggtggctgggttcagaggctgtctgcatcattaacttccaacacctc
atcctgcctgagagacaccccccacacactgagctgctggacctgcagccgttgcccatc
accgccctggggaacacggagtacgagaatctgtacaagttcacccacttcaaccccatc
cagacacagatcttccacacgctctaccacaccgacaccaacgtcctgctgggggcgcca
acgggctccggtaaaaccatcgctgccgagttggccatgttccgagtcttcaaccagtac
cctacctccaaggtggtgtacattgcccctctgaaagctctggtcagggagaggatcgag
gactggaaggtcagaatagaggaaaaactggggaagaaggttgtggagctgacaggtgat
gtgactccagacatgcgggccatcgccgcggccgacctgatcgtgaccacgccagagaag
tgggacggcgtgagtcgctcctggcagaaccgcagctacgtccagaaagtagccatcctc
atcatcgacgagatccatctgctaggggaggacagaggtcctgtgctggaggtcatagtt
tccaggaccaacttcatctcctcccacaccaaaaagactgtccgcgtggtgggcctgtcc
acggccctggccaacgcacgagacctcgccgactggctagggattggacaggtgggtttg
tttaacttccggccatctgtgcgtcccgtcccattggaggttcacatccacggcttccca
ggacagcactactgcccccgcatggccagcatgaacaagcctgtgttccaagcaattcgc
agtcactctccagccaagcctgttctgatctttgtgtcgtcgcggcgacagactcgtctg
acagctcttgacctgatagccttcctggccaccgaggacgaccccaaacagtggctgcac
caggacgagactcagatgacagacatcatcgccacggtgagggagtccaacctgaagctg
acgttggcgttcggaatcggcatgcaccacgctggactacacgagagagacaggaaaact
gtggaggaactgtttgtcaactgcaagatccagatactaatagccaccagcactctggcc
tggggagtaaacttccctgcccatctggtcattgtcaaaggtactgagtactacgatggg
aagaccagacgctacgtggactaccccatcacagacgtgctgcagatgatgggccgtgca
ggccgccctcagtatgacgaccagggcaaagctgtgatcctggtccacgacatcaagaaa
gacttctacaagaagttcctctatgaacccttccctgttgagtccagtctcatgggtgtg
ctgtcagaccatctgaatgctgagattgctgcagggaccatcacctctaaacaggacgct
atggactacatcacctggacgtacttcttccgcaggctggtcatgaaccccagttactac
agcctggatgacatcagccacgagaccgttaacaagtacctgtccaacctggtggagagg
agtctccgagacctggagtgttcctactgtatggagataggagaggatgattgcacaatt
gagcccctgacgtacggtcgtatctcctcctactactacctgaagcaccagacagtcagg
atgttcaaggagaggctgagggctgagctgcccatccaggacatcctctctgtcctcacg
gatgctgaggagtacggggagctgcccgtcaggcacaacgaggaccagctgaacagtgag
ctggctcagcgtctccccctgcaggtcaacccccacagctacgacagcgcccacaccaag
acacacctgctgctgcaggcccatttcagccgcgcccagctgccctgctccgactatggc
accgacaccaagaccgtgctggacaacgccatacgcatctgtcaggccatgctggacgta
gcagccaacgagggctggctggtgactgctctcagcatctgtaacctggtgcagatgatc
gttcagggcaggtggctcaatgactcctctatactgaccctacctaccatagagcagcaa
cacctctacctgttcagcaggtggagctccaagggagggaggggcggagccaggggcttc
cacggaccaatagaagggctccctgagctgattgccacctgcgaggggcgggagaacacc
ttcgctgccatcgtgggggaggcgcttcagccccatcagatctcccaggcctggtcattc
ctcagccatctgccggtgatggaggtgcgtctgagtgtgaagggttggtgggaggggtgt
ggggagcagacagagcgccccctccctgcggccggggggaagctcagggacgacaaaagc
tggctggatgtccacgctgaccaggagtacgtcctgcaagtctcactgcagcgcatcaac
accggccagcagaggaggaagcaggacagtaaggcccaggcccccaggttccctaagaat
aaggatgagggctggttcctggttctaggagaggtggagcgcagagagctactggccgtc
aaacgcattggatactgccgacaccgcagcaccgtttccctggccttctacacccccgag
aagaccggaaagtgtatctacacgctatacttgatgagtgacagttacctgggtctggac
cagcagtatgacctccacctcaacgtgacccctgcctgcatcgctgcccaggtcaacagt
gaagtcactgaggccatgggaggcatgtccttcaagtga
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integrated database retrieval system
