Coregonus clupeaformis (lake whitefish): 121543046
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Entry
121543046 CDS
T08357
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin-like
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121543046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121543046
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
121543046
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltr_RsmB-F
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
121543046
NCBI-ProteinID:
XP_041708675
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MCAACSEEEEEEEEEEKTKPGKASSSCFRLKANMRPGFSPRGGDRGGFRGRGSFGDRGGG
RGGFGDRGGRGGFRGRGGGGGFRSPSGEGGFRGRGGGRGTPRGRGGRGGFGAGRKVTVEP
HRHEGVFICRGKEDALVTKNMVIGESVYGEKRMNVEEGETKIEYRAWNPFRSKLAAAILG
GVDQIHIKPGSKVMYLGAASGTTVSHVSDIVGPEGLVYAVEFSHRSGRDLLNVAKKRTNI
IPIIEDARHPHKYRMLVGMVDVIFADVAQPDQTRIVALNAHNFLKNGGHFVISIKANCID
STAAPEAVFAAEVKKMGSENMKPQEQLTLEPYERDHAIVVGIYRPAPKIKK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctgcgtgttcagaagaagaagaagaagaagaagaagaagagaaaacaaaaccg
ggtaaagcaagctcgagctgttttagattgaaagcaaatatgagaccaggattcagccct
cggggtggtgatcgaggaggcttcagaggaagagggagctttggagacagaggtggtgga
cggggaggttttggcgatagaggcggacgaggaggtttcagaggcagaggtggtggaggt
ggatttaggtctccaagtggcgagggtggcttcagaggccgtggaggtggtcgtggcacc
cccaggggtagaggtggacgtgggggctttggggcgggcaggaaagtcacagtggagcct
catagacatgaaggagtgttcatctgccgtggtaaggaagatgccctggtgacaaagaac
atggtgattggagagtctgtgtatggagaaaaaaggatgaatgtcgaggaaggggaaaca
aagattgagtacagagcgtggaatcctttccggtcaaagctggcagcagccatcttggga
ggagttgaccagatccacatcaaacctggctcgaaggtcatgtacctgggagccgcatca
gggacgacagtgtcccacgtgtcagacatcgttggacctgagggtcttgtgtatgctgta
gagttctctcacaggtcaggacgtgatctgctcaatgttgccaaaaagagaaccaacatc
attcccatcattgaggacgcccggcatccacacaaataccgcatgcttgttggcatggta
gatgtcatcttcgctgatgtggcccagcctgatcagaccagaattgttgcactcaacgct
cacaacttcctcaagaacggagggcattttgtcatctcaatcaaggcaaactgcattgat
tcaacggcagcaccggaggctgtatttgctgcggaggtgaagaagatgggctcagaaaac
atgaagccccaggagcagctgacactggagccttatgagagagatcacgccatcgtagta
ggaatctacagacctgcccccaagattaagaagtga
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