Coregonus clupeaformis (lake whitefish): 121543087
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Entry
121543087 CDS
T08357
Symbol
sv2a
Name
(RefSeq) synaptic vesicle glycoprotein 2A
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121543087 (sv2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121543087 (sv2a)
Transporters [BR:
cclu02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
121543087 (sv2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
MFS_2
MFS_4
Pentapeptide_4
Motif
Other DBs
NCBI-GeneID:
121543087
NCBI-ProteinID:
XP_041708727
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All DBs
Position
17:24815835..24866312
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AA seq
736 aa
AA seq
DB search
MDDGYGRDGRQDFIRGAKDIAKVVKKQAGKKVGRSVDKMADEYTKRSYKRFEEEDDDDDY
PVQQSQDGDGYYRNDSRANDDEGGHSDSTEGHDEDDEIYEGEYQGIPRAESGKTGPLDGM
APQGQIRDLAQFEAERRKDQEELAQQYETILQECGHGKFQWTLYFVLGLALMADGVEIFV
VGFVLPSAEKDMCLSEESKGMLGLIVYLGMMVGAFVWGGLADRIGRRQTLLISLSINSVF
AFFSSFVQGYSSFLLCRLLSGVGIGGSIPIVFSYYSEFLAQEKRGEHLSWLCMFWMIGGI
YASAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVAAISALTTMPESPRFFLENG
KHDEAWMILKQVHDTNMRAKGYPERVFSVTTIKTVKQMDELVDMGDGTAWHQRWRMKLAD
LFNQVWSNFLAIFSPEYRRTTLMMMAVWFSMSFSYYGLTVWFPDMIKYLQKQEYSSRTKV
FIKEKVEHVTFNFTLENQVHRNGEYFNNKFMNLKMKSMVFEDSLFEECYFEDITSSNTFF
KNCTFIATLFYNTDLFKYRLINSKLVNSTFLHNKEGCMLSDFSDENSAYMIYFVSFLGTL
AVLPGNIVSALLMDKIGRLRMLAGSSVISCVSCFFLSFGNSESAMIALLCLFGGISIASW
NALDVLTVELYPSDKRCTAFGFLNALCKLAAVLGISIFTSFVGITKAVPILFASGALAAG
SFLAFKLPETRGQVLQ
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggacgatggctacggacgagacggacggcaggacttcatccgcggtgccaaagacatc
gctaaggtagtgaagaagcaggcgggcaagaaggttggccgcagcgtggacaaaatggca
gatgagtacaccaagcgctcgtacaagcgcttcgaggaagaggatgacgatgacgattac
cccgtgcagcagagccaagatggcgacggctactaccgcaacgacagtcgggccaacgac
gacgagggcggccacagcgactccacggaaggtcacgacgaagacgatgagatctacgag
ggcgagtaccaggggatcccccgggcagagtccggcaaaacgggtccgttggacgggatg
gccccccaaggtcagatcagggacctggcccagttcgaggcggagaggaggaaggatcag
gaggagctggcccagcagtacgagaccatcctgcaggagtgtggccacgggaagttccag
tggacgctgtactttgtgctggggctggcgctgatggcggacggtgtggagatctttgtg
gtgggctttgtgctgcccagtgcagagaaggacatgtgtctgtcagaggaaagcaagggc
atgttgggtcttattgtctacttggggatgatggtgggggccttcgtgtggggcggcctg
gccgaccggatcggacggcgacagaccctcctcatctctctctccatcaacagcgtcttt
gccttcttctcctccttcgttcaaggatacagctctttccttttatgccgtctgctctcc
ggcgtgggcatcggtggctccatccccatcgtgttctcctactactctgagttcctggcc
caggagaagagaggagagcacctcagctggctctgcatgttctggatgatcggtggcatt
tacgcctctgccatggcctgggccatcatcccgcactatggctggagtttccagatgggc
tctgcgtaccagttccacagctggcgtgtatttgtgttggtgtgtgccttcccctctgtg
gcagccatctctgctctcaccacaatgcccgagagcccacgcttcttcctggagaatgga
aaacacgatgaggcttggatgattctgaagcaggtccatgacaccaacatgagggcgaag
ggctacccagagagggtcttctctgtgaccaccatcaagacagttaagcagatggatgag
ctggtggacatgggagatggcaccgcctggcaccagagatggaggatgaagcttgctgac
ctgttcaatcaggtgtggagcaacttcctggccatcttctctcctgagtaccgccgcacc
actctcatgatgatggctgtgtggttctctatgtccttcagttactatgggctgacggtg
tggttccctgacatgatcaagtatctccagaagcaggagtactcctcgcgcaccaaggtc
ttcatcaaggagaaggtggagcatgtcaccttcaacttcaccctggagaatcaggtgcac
cgcaacggagagtacttcaacaacaagtttatgaatctgaagatgaagtccatggtgttt
gaggattctctgtttgaggagtgctactttgaagacatcacctccagcaacaccttcttc
aagaactgcacctttatcgccaccctcttctacaacacagatctgttcaagtacaggctg
atcaatagcaaacttgtcaacagcaccttcctgcacaacaaggagggctgcatgcttagc
gactttagcgacgagaacagtgcctacatgatttactttgtcagcttcctgggcaccctg
gctgtgttgcctggcaacatcgtgtcggcactgctcatggacaagatcggacgactgagg
atgctggcgggctccagtgtgatctcttgtgtcagctgtttcttcctgtcgttcggcaac
agcgagtcggccatgatcgctctgctctgtctgttcgggggcatcagcatcgcctcctgg
aacgccctggacgtgctgacggtggagctctacccctctgacaagagatgcacagcgttt
ggctttctaaatgccctctgtaagctggcagccgtgttgggcatcagcatcttcacctct
ttcgtgggcattaccaaggctgtgcccatcctgttcgcctccggggcgcttgcagcaggc
agcttcctggcgttcaagctgccggagacgcggggccaggtgctgcaatag
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