Coregonus clupeaformis (lake whitefish): 121543123
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Entry
121543123 CDS
T08357
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121543123
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
121543123
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_14
ig
LRR_9
Ig_2
V-set
LRRNT
LRR_Zer-1
Ig_5
Motif
Other DBs
NCBI-GeneID:
121543123
NCBI-ProteinID:
XP_041708761
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All DBs
Position
28:20882599..20904461
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AA seq
611 aa
AA seq
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MFVESVVRWGAWSILLQCGLLGVSAGDFPWPCPPRCVCRLETLEVNCSGKQLTSVSEGFA
SGAQHINLSRNKLKTLGRRQFFGMTQLEDLDISDNVISMIEVDAFQGLQNLKTLCIRRNR
LKIIPVGVFSGLPSLRFLDLSENEILVFLDYTFRELVSLQQLEAGENDLVFISQRAFTGL
QNLQELNLDRSNLTSIPTEALSQLQSLTRLRMIRLTISALPNNAFRRLHRLRSLVISHWP
SLDTLASNSLIGLNLTSLVISSCNLSAVPYQALRHLVYLGYLDLSYNPITAIQGNLLGDL
LRLQELHLAGGSLLRIEPGAFRGLAYFRLLNVTSNQLSTLEESAFHSVGNLQVLRLDGNP
LACDCRLLWVVRRRQRLNFDGRQPTCSTPDMVREREFRDFSEKELPRLFTCRQARIVDRR
SQEVRVEEGTTVLFSCKADGDPVPSFTWLSAQRIPLSTTGRIRVLSNGTLEVRYAQVQDS
GTYQCMAGNAAGNDSLYVSLYVKGFPRNRTMPFFTDEGWIESSNAPTANSSAQVANQYPF
DAKTLIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDYVPRPSMGVGGGGGGG
GDAGKFTMKLI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtctgttgtccgatggggggcatggagcatcttgctccagtgtggatta
ttgggcgtgtcagcaggggacttcccctggccctgccctcccaggtgtgtgtgtcggctt
gagactttagaagtgaactgctctggcaaacagctgacttctgtgtctgagggcttcgct
agtggcgcccagcacattaacttatctcgtaataagctgaagacgctgggtcgtcgccag
ttctttggcatgacccagctagaggatctggacattagtgacaatgtcatctccatgatt
gaggtggatgctttccagggtctgcagaacctcaagaccctgtgcattaggcgcaaccgc
ctcaagatcatccctgtgggggtcttctccggcctgcccagcctgcgcttcctggacctg
agtgagaacgagatcctggtctttctggactacaccttccgtgagttggtgagcctgcag
cagctggaggctggggagaatgacctggtgttcatctcccagcgggcctttaccggcctg
cagaacctgcaggagctcaatctggaccgcagcaacctgacctccatcccgactgaggca
ctgtcccagctccagagcctgactcggctgcgcatgatccgcctcaccatctcggcgctg
cccaacaatgccttccgccgcctgcaccggctacgcagcctcgtcatctcccactggccc
tcgctggacaccctggccagcaacagcctgattggcctcaacctcacctcgctggtcatc
agcagctgcaatctcagtgctgtcccataccaggcgctgcgccacctggtctacctgggc
tacctggacctgtcctacaaccccatcacagccatccagggtaacctgctgggggacctg
ttgcggctgcaggaactgcacctggctgggggcagcctgctccgcatcgagccaggggcc
ttcagggggctggcttacttccgtctgctcaatgtgacatccaaccagctcagcacgctg
gaggagagtgccttccactctgtggggaacctgcaggtcctgcggctggatgggaacccc
ctggcctgtgactgccggctgctctgggtggtccgccggcgacagcgcctgaactttgac
ggccgccaacccacctgctccaccccggacatggtgcgagagcgggaattccgggacttc
tcggagaaagagctcccgagactgttcacctgccggcaggcccgcattgtggaccgcagg
tcccaggaggtcagggtggaggagggcactacggtgctcttctcctgcaaggcggacggt
gacccagtgccctcctttacatggttgtcggcccagcggattccgctctccactacgggg
cgcatcagggtgttgtccaatgggactcttgaggtacgctatgcccaggttcaggacagc
ggcacataccagtgcatggcgggaaacgcagctggcaacgacagcctgtacgtcagcctc
tatgtgaagggtttcccacgtaaccgcaccatgccctttttcaccgatgagggctggata
gagtcctcaaacgccccaactgccaactcctccgcccaggtggccaaccagtacccgttt
gatgccaagacactgatcatcgccaccaccatgggcttcctgtccttcctcagctcggtg
gctatctgcttcgtcttcatgttcttctggagccagagcaaggggcaaatcaaacacaca
gccaccatcgactatgtgccccgtccctcaatgggggtaggaggaggaggagggggtgga
ggggatgctggcaagttcaccatgaagcttatctaa
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