Coregonus clupeaformis (lake whitefish): 121543135
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Entry
121543135 CDS
T08357
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
121543135
NCBI-ProteinID:
XP_045071812
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MRLVPGSPRPLPLLAVGLALALTALLPHLAMGATPFPQDLEPISIVGREHSYLYPSFQGL
MSDNDTVRLGLDFQRMLRINHMLYIAARDNVFAVSLSASSEQIVPQQKLTWKTKDVDKCT
VRGKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSTLEQDGEEVVGQARCPFE
SRQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIE
YGNYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPG
DSFFYFDVLQSLTNVLQINHRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFNGKFKEQR
NSESAWTPVPEEQVPKPRPGCCAGDGSAAAYKSSTTFPDDTLTFIKNHPLMDEAVPSVNH
RPYFTRTTSRFKLTQLAVDTSAGPYKNHTVLFLGSEDGRVLKILASTQPNASFSTQLLED
INVYNPTKCNVRGEDRRVLGLELDREHHALFVAFSSCVIRVPLSRCSDYGSCKKSCLSSR
DPYCVWQRTGSCATVVPGFRGGFEQDVENGYPHYPDSCHDVLATTRKQNTLADSAYGKTT
PTTTASTTNQVAPFPKVAGDSERGTGPDGGPPVPVGDQGSPDSEPISVEMEGVRRPPEME
KTNHSVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHTGHKTKRLAKDPEAPIPHALSLRS
LAKLNGLLDSQNKEDKMEVSSPKLYNSFFQNGKEHHQGAPRRTGGHHPGMTMGDLVHPHH
LHHSSELSGLPTPDSTPELPIKNMKAFKNQWEKNQNCNNAKEPKSHNIGQGSRPSSGLLH
QQIYPYSHSFSNGQALANGHALVGGPQLLEERKIHNAERMFVQQPYPCYPQKVMEVTSLD
ELLKHIHEANTSKNAQVMTSSGLSASGGCHGGQLAFSNRVQPHIPETESAPYYSSSTLPR
DSLTRRMDVPPDMPPHHQSTLERRHSSQRHSLITAATKIANGGGGGGMVHRQQSFSQRNG
HQHQPPPMLARMNSTGSACEIHYPLIPNGYLTRQQSYNGEQQEDTGGYLHRGAIVRRTTS
LKPDVPPKPLFIPASSPVNQQGNFNY
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtgcccgggtcgcctcggcccctcccccttctggcggtgggcctggctcta
gccctcacagctctcttacctcacctggccatgggagccacacccttcccccaggacctg
gagccaatcagcattgtgggaagagaacactcctacctgtaccccagcttccagggcctc
atgtcagacaacgatacagtacgactgggcctggacttccagaggatgctccggatcaac
cacatgctctacattgcagccagggataatgtgtttgctgtcagtctcagcgcctcctct
gagcagatcgtcccacaacagaaattgacttggaagacaaaggacgtggacaaatgcaca
gtgagggggaagaacagtgatgagtgctacaactacatcaaagttctggtcccacgcaac
gatgagacgctatttgcctgcggtaccaacgcctttaacccgacctgccgcaactacaag
atgtccacactggaacaggatggtgaggaggtggtgggtcaggcccgctgtccctttgag
tctcgccaatccaacgtcggcctcttcgctggtggcgatttctactcggccaccatgaca
gacttcctggcgagtgatgcagtgatttaccgtagtctgggagagagcagcccggtgctt
cgtaccgtgaagtacgactccaaatggctacgagagcctcatttcctccatgccattgag
tacgggaactacgtgtacttcttcttcagtgagattgctgtggagtacaccacacttggc
aaggttgtgttctccagagtggctcgtgtatgtaagaatgacaacggaggttctcccagg
gttctggagcgttactggacgtcgttcctcaaagcgcggctcaactgctcggtgccgggc
gattccttcttctactttgacgttctgcagtcgctgaccaacgtgctgcagatcaatcac
agaccagccgtgctgggggtcttcactacacaggccaacagtatcacaggctcagcagtg
tgtgcattctacatggatgacattgagaaggccttcaacgggaagttcaaggagcagagg
aacagtgagtcagcctggacgcctgtgcctgaggagcaagtgcccaagcccagaccaggc
tgctgtgccggcgacggctctgccgctgcctacaagtcgtccacgaccttccccgatgac
accctgactttcatcaagaaccaccccctgatggacgaggcagttccctccgtcaaccac
cggccctacttcacacgcacaaccagcaggttcaagttgacccagctagcagtggatacg
tcagctgggccctataagaaccacacggtgctgttcctggggagcgaggacggcagggta
ctgaagatcctggccagcacccagcccaacgcctccttcagcacacagctactggaggac
atcaatgtctacaaccccaccaaatgtaacgtccgcggagaggacagacgggttctggga
ttggagctggacagggaacatcacgccctgtttgtggccttctccagctgtgtgatccga
gtacctctgagccgctgcagcgactatggctcctgcaagaagagctgtctgtcctcgagg
gacccttactgcgtgtggcagaggacggggagctgtgccacggtggtgcccggattcagg
ggcggatttgagcaggatgtggagaacggctaccctcactacccagatagctgccacgac
gtcctggcgaccacacgcaagcaaaacactcttgctgattcagcatatgggaagaccaca
cccacaacaaccgccagcacaaccaatcaggtggccccattcccaaaggtggcaggtgac
tctgaaagaggtacaggtcctgatggcggtcctccagtcccagttggggaccaggggtca
cctgactcggaaccaatcagtgtggagatggagggtgtccgacggcctcccgagatggag
aagaccaaccacagtgtccactacaccctgctgatcgcctgtgtgctggtggcctttgtc
cttggagccttcctctcaggctttctggtctcctgctactgcaaccacaccggccacaag
accaagaggctggccaaggacccggaggcccccatccctcacgccctgtccctacgcagc
ttggccaagctcaatggcctgctggacagccagaacaaggaggataagatggaggtgtcc
tcgcccaagctctacaactccttcttccagaacgggaaggagcatcatcaaggagcaccc
agacggaccggtggtcaccacccagggatgaccatgggagacctggtccacccccatcac
ctacaccactcttcggagctctcgggtctgcccaccccagactccacccctgaactgccc
atcaagaacatgaaggctttcaagaaccagtgggagaagaaccagaactgcaacaatgcc
aaggagcccaagtcccacaacattggacaaggctccaggcccagctcaggcctgctccac
cagcagatctacccctactctcacagcttctccaatgggcaagctctggctaatgggcat
gccctggttggtggaccccagctcctggaggaacgcaagatccacaatgcagagcgcatg
tttgtccagcagccttacccctgctacccgcagaaggtgatggaggtcacgtcgctggac
gagctgctcaaacacatccacgaggccaacaccagcaagaacgcccaggtcatgacctca
tccggcctgtcagccagtggcgggtgccacgggggtcaactagctttttccaaccgtgtc
cagccgcacatccccgagacggagtcagcaccttactacagctcatccaccctgccccga
gacagcctgacccgccgcatggatgtacctccggacatgccccctcaccaccagtccacc
ctggagcggaggcactcttcccagagacactcactgattaccgctgccactaagattgcc
aacggagggggtggtggagggatggtccaccggcagcaaagcttcagccagcgtaacggc
caccagcaccaaccgccccctatgctggctcgaatgaactccaccggcagcgcctgcgag
atccactacccgctcatccccaatgggtacctgacgcgccagcagagctacaacggagag
cagcaggaggataccggaggatacctccaccggggggccatagtccgccggaccacttcc
ctcaaacccgacgtccctcccaaacccctcttcatccccgcctcctctcccgtcaaccaa
cagggaaacttcaactactga
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