Coregonus clupeaformis (lake whitefish): 121543167
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Entry
121543167 CDS
T08357
Name
(RefSeq) RNA-binding motif protein, X chromosome-like isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121543167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121543167
Spliceosome [BR:
cclu03041
]
Common components
Common spliceosomal components
hnRNP proteins
121543167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_7
Nup35_RRM_2
PHM7_cyt
RRM_5
RRM_occluded
RBD_DEAH11
DUF7373
Motif
Other DBs
NCBI-GeneID:
121543167
NCBI-ProteinID:
XP_041708806
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All DBs
Position
3:26816324..26820245
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AA seq
387 aa
AA seq
DB search
MAEADRPGKLFIGGLDTETNEKALEKYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPA
DAKDAAREMNGKSLDGKPIKVEQATKPQFESAGRRGPLPMRGRGPPRGPRGSRGAPSGMR
GPPSRDYYDNVGIVEPFFKGISSRGPPPLKRGPPIRNGGPPPKRHASSPMGRPPMSRDRD
PYGPPPPRRESMSRRDDYPSPRDEYYSTKDSYSSREYVSSRDTRDYAPTPRDYPPRDYPQ
SSSRDEYGSMSRGYSDGYGGGREPKSYMERPSAASYREPYDGYGNSRSAPPSRGPQPSYN
GSGGSSRYDDYGSSSRDGYGSRESYPSSRSEPYPPSRGERMGRQERGPAPPIERGYPREA
YSGSSRGAPRGGRGGSRVDRGIARSRY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggctgatcgaccagggaagctcttcattggtggcctggacactgaaactaac
gagaaggcccttgagaagtatttcagcaaatatggcagaatagtagaagttctgttgatg
aaagaccgtgaaacgaacaaatcaagagggtttgcttttgtgacctttgagagtccagca
gatgcaaaggatgctgcgcgtgaaatgaatgggaagtcgcttgatggtaagccaattaag
gttgaacaagctacaaagcctcagtttgagtcagcaggcagacgtggcccactccccatg
cgcggccgtggtccccctagaggccctcgaggatctagaggagcaccaagtggaatgagg
ggtccaccatccagagactactatgataacgtagggattgtagaaccctttttcaaaggg
atttcctccagaggccccccaccactgaagaggggacctccgattcgtaatggaggcccc
ccaccgaagagacatgcttcttctccgatgggcagacctcccatgtcaagggacagggac
ccctacggcccaccccctccccgcagagagtctatgtccagaagggatgattacccatca
ccaagggatgaatattacagcacaaaggacagctattctagccgggaatatgtgagttcc
agggatacaagggactacgcaccaacaccaagggactatccgccaagggattatccccaa
tccagttcccgcgatgaatatgggtcaatgtcaaggggctacagtgatggttatggggga
ggccgggaacccaaaagctatatggagcgccctagtgcagcctcttatcgagagccctac
gatggttacggtaactcacgcagcgccccaccctcaaggggcccacaaccatcctacaat
ggcagtggcggaagcagtcgctatgacgactatggcagcagttcccgggatggctatggc
agtcgtgaaagttaccccagcagtcggagtgaaccataccctcctagccgtggtgagcga
atgggcaggcaggagcgggggccagcacccccaatcgagagaggctaccctcgtgaagcg
tacagtggctcaagtcgcggggcgccccgtggcggccgcggtggcagcagagtcgataga
ggaattgcccgcagcagatactga
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