Coregonus clupeaformis (lake whitefish): 121543201
Help
Entry
121543201 CDS
T08357
Name
(RefSeq) SHC-transforming protein 1 isoform X1
KO
K06279
SHC-transforming protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04012
ErbB signaling pathway
cclu04510
Focal adhesion
cclu04910
Insulin signaling pathway
cclu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121543201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
SH2
PGM_PMM_IV
DUF7063
Delta_lysin
DUF7461
Motif
Other DBs
NCBI-GeneID:
121543201
NCBI-ProteinID:
XP_041708856
LinkDB
All DBs
Position
17:1023512..1049893
Genome browser
AA seq
591 aa
AA seq
DB search
MMELVPKTKYTHFRSESLSSNDDTNSNPSSLPPSTPATPLTPPGLPSSLSSSSLTPILPP
SRRRAENSPTTLCSFFPRMGALRLGVSATLLPGLKASSRPQQAQAPMESSGVNSSSSRSP
PPHPPHCLTAPSPPPRPPLQDMNRLGGASRRARVEGGQLGGDEWTRHGSFVNKPTRGWLH
SDHVVSTTGVAYSVRYMGCVEVLQSMRALDFNTRTQVTREAISVVCEAVPGAKGAQRRRK
PSSRCMTSILGKRNLQFAGMTISLTVSTISLNLLASDCKQIIANHHMHSISFASGGDPDT
AEYVAYVAKDPVNQRACHILECSEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMA
PFDSSAWEEEEDEGAPPSAEVPYYNNFPGKQPPPGGLVDMRGRPGATLPYGQPGQNDIHK
QPLPPLPMGAKEGGRDLCDDPSYVNVDKPRPPAAAANGNAHRDAFDMKPFDDSLGVSGLG
VSAAPPLVEQLQCEAWFHGSLSRRQAERLLTRDGDFLVRESGTTPGQYVLTGQQGGQPKH
LLLVDPEGVVRTKDHHFESVSHLISYHMDNRLPIVSAGSEVCLQQPVEHRA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctggtccctaaaactaagtacactcacttccggagtgaatctctcagttcg
aatgacgataccaactccaatccctcctccctcccaccttccacccccgcaacccccctc
acccctcctgggctaccctcctccctgtcctcctcctctctcacccccatcctcccccct
tcccgccgccgagccgagaacagccccaccacgctctgctccttcttccccaggatggga
gcccttcgcctgggcgtctctgccactctactcccaggcctcaaggcctccagcaggcct
cagcaggctcaagcccccatggagtcttcaggggttaacagttccagttccagatctccc
cctcctcacccccctcactgtctaacagccccttctcccccccctcgtccccctttgcag
gatatgaaccggctgggcggggcgtccaggagggcgcgggtggagggggggcagctgggg
ggagatgagtggacgcgccacgggtccttcgtcaacaagcccaccagaggatggctacac
tcagaccacgtggtcagcaccactggggttgcctactctgtacggtatatgggctgtgtg
gaggtgctacagtctatgagggcgctggacttcaacaccagaactcaggtcaccagagag
gctatctcagtggtgtgtgaggcagtgcccggagccaaaggagcccaacgcaggagaaag
ccgtcgtctcgctgtatgacgtccattctggggaaaagaaacctgcagtttgctgggatg
accatcagcctgacggtctctaccataagcctcaacctgctggcctctgactgcaaacag
ataatcgccaatcatcacatgcactccatctctttcgcttctggaggagacccagacaca
gcagagtatgtagcatacgtggccaaagacccagtcaaccagagagcgtgtcatatcctg
gagtgttcggagggcttggcccaggatgtcatcagtacgataggacaggccttcgaacta
cgcttcaaacagtacctgaagaacccccccaaattggtcaccccccatgacaggatggct
ccgtttgacagctcagcgtgggaggaagaggaagatgagggagcaccgccctctgcagag
gttccgtactataataacttccccgggaaacaacctcctcctggaggactggtggacatg
aggggccgtcccggggctaccctgccctatggacagccgggtcagaatgatattcacaag
cagccgctgccccctctaccaatgggagcaaaggagggagggcgggacctgtgtgatgac
ccttcatacgtcaatgtggataaaccccgcccaccagcagctgcagccaatggcaacgct
cacagagatgcgttcgatatgaagccgtttgatgattccctgggtgtatcaggtctgggg
gtctcagcggcaccccctctggtggaacagctgcagtgcgaggcctggttccacggcagc
ctgagtcgcaggcaggctgagagactgctgacccgcgacggagacttcctggtccgagag
tcaggcaccacccctggacagtacgtcctcactggacaacaggggggtcagcccaaacac
ctactactggtcgacccagagggagtggtacgtaccaaagaccaccactttgagagtgtg
agccacctgatcagttaccacatggacaacagactgcccatagtatcagcaggcagtgag
gtgtgtctgcaacaaccagtggagcacagggcctga
DBGET
integrated database retrieval system
