Coregonus clupeaformis (lake whitefish): 121543239
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Entry
121543239 CDS
T08357
Name
(RefSeq) epithelial splicing regulatory protein 1-like isoform X1
KO
K14947
epithelial splicing regulatory protein 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121543239
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121543239
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_1
Motif
Other DBs
NCBI-GeneID:
121543239
NCBI-ProteinID:
XP_041708927
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Position
17:complement(2260482..2273370)
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AA seq
736 aa
AA seq
DB search
MTAQVDYLAVLFTTTSGASGDLLGSDEKELVQLVWQLVDLNNKKLGKVNEVLIRPEHSDL
AEDCLGEREDGDEVEDSEESVSTVTGLEHALNQFHLRLTNEVNTLGTGTSVCVCTDGQLH
IRQVLHPEAADKNLALPECFNSFFDLRKEFRKHFPSADTKSLEVQYMAESLSVTVEPVAM
LDPTPVTAALQVQTMANIVLALLSEPLRHTFSNPERVTEKFESGTCSKMERVCDNTVIRA
RGLPWQSSDQDIARFFRGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDMALQRHKHH
MGNRYIEVYKATGEDFLKIAGGTSSEVALFLSREDQVIVRMRGLPFTATPDQVLAFFYQG
EGPKEACPVSGDKDGILFVRFPDGRPTGDAFVLFASEEHAQCALRKHKDILGKRYIELFK
STAAEVQQVLNRYSSAPLIPVAPAPLVSLLPSVSLLPSPGGVRDCLRLRGLPYTATIEDI
LAFLGEYTHDIRPHGVHMVVNQQGRPSGDCFIQMRSAERAFSASQRVHKQVMSGPGQAGK
RGLNSRYVEVFPCSAEEMGLVLMGGSLSHTHTHTHTRTRSGTGLSPPPCKSRRLSPPSYS
FPSAPSILPAEAAGLFPPIGQMLLSPRPLGPGHAYYPASTQLYMNYTAYYPSPPGSPNTI
GYYPSPSPLPSPGGVVRMHGLAYKELLNTIQGYQSPMEALPVLSGMIGQSSSGDALMPFP
PLLTKQGGYYLDRNML
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgacggctcaggtagactacctggcggtgttgttcaccaccacatctggcgcgagcgga
gacctcttgggttcggacgagaaggagctcgtgcagttggtgtggcagctcgtggatttg
aataacaaaaagttggggaaagtgaatgaggtgttaatacggcctgagcactccgacctg
gcagaagattgtctgggggagagagaggatggggatgaagtggaggacagcgaggagtct
gtctctacagtcacaggcttggagcacgcgctaaaccagttccatctgagattgaccaat
gaagtgaacaccttgggcacgggcacgtcagtgtgtgtgtgtacagacgggcagctccac
attcgccaggttctccaccccgaagctgcagacaagaacctggcactgccagaatgtttc
aactccttttttgacctgaggaaagagttcaggaagcacttcccctctgcagacaccaag
agcctggaggtgcagtacatggctgaatctctcagtgtaactgtggagccagtagccatg
ttggatccgacgccagtcacagcagcactgcaggtccagaccatggccaacatcgtccta
gccctgctatctgaacccttacgtcacacattctcaaacccagagagagtcactgagaag
tttgaaagcggcacttgcagtaagatggagcgtgtgtgtgataacacggtgatcagagcg
agggggttgccttggcagtcatctgaccaggacatcgctcgcttcttcagaggactcaac
attgccaaaggtggcgctgcgttgtgtctgaacgcccagggtcggaggaacggagaggct
ctggtccgctttgtcagtgaggaacacagagacatggccctgcagagacacaaacaccac
atgggcaacagatacatagaggtgtacaaggcaacaggagaggacttccttaagatagca
ggcggtacctccagtgaggtggcgctgttcctgtctcgtgaggaccaggtgatcgtcagg
atgcgaggtcttcccttcaccgccacacctgaccaggtgctggccttcttctaccagggg
gaggggcctaaagaggcgtgtcctgtcagtggtgacaaggatggcatcctatttgtgcgt
ttccctgatggaaggcctactggcgacgccttcgtcctattcgccagtgaggagcatgct
cagtgcgctctcaggaagcacaaagacatcctggggaagagatatattgagctattcaag
agcaccgccgctgaggtgcaacaggtgttgaacaggtactcgtcagcccctctgatcccc
gtggctcctgccccccttgtgtcactgttgccctccgtgtctctgttgccctctcctggt
ggtgtgagggactgcctcaggctgagggggctgccctacaccgccaccatagaggatata
ctggccttcctaggagaatacacacatgacatcagaccacacggagtacacatggtggtc
aaccaacagggtcgtccgtcaggggactgtttcatccagatgcgttcagcggagcgggct
ttctctgcctcccagcgggtccacaagcaggtgatgtctggtccgggccaggctggcaag
cgagggcttaacagtcgctatgtggaggtgttcccctgtagcgctgaagagatgggtctg
gtgttgatgggaggctccctctcacatacacacactcacacacacacccggaccaggagt
gggacagggctcagcccgccgccatgtaagtccagacgtctgtctcctccctcctactcc
ttcccatccgccccttccatcctgcctgctgaggctgccggcctcttccctcccattggt
cagatgctgctgagtccccgccccctaggacctggacacgcttactacccagctagcact
cagctctacatgaactacactgcatactatcccagtcccccaggttctcccaacactata
gggtactacccctccccctcccctctgccctcccctgggggagtggtccgtatgcatggg
ctcgcctacaaagaactgctcaacaccattcagggataccagagtcctatggaggcattg
cctgtcctgagcggtatgattggtcagtccagcagtggtgatgctctgatgccctttccc
cctctcctgaccaagcagggagggtactacctggaccgaaacatgctgtag
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