Coregonus clupeaformis (lake whitefish): 121543248
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Entry
121543248 CDS
T08357
Symbol
tex10
Name
(RefSeq) testis-expressed protein 10 homolog
KO
K14827
pre-rRNA-processing protein IPI1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121543248 (tex10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121543248 (tex10)
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
121543248 (tex10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
HEAT_GCN1
HEAT_MROH2B_C
HEAT_EF3_N
HEAT_GCN1_C
TPR_IPO5
TPR_CAND1
Vac14_Fab1_bd
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
121543248
NCBI-ProteinID:
XP_045062922
LinkDB
All DBs
Position
24:3976249..3985864
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AA seq
942 aa
AA seq
DB search
MTKCKKKKRQDDFQKVKLKVGKTKPKAGNATNINFRTKGINLTEQLKKDANAPTTHRKLN
IKDLLSQLHHYSGTVKQGALVGLRELLTLHPSELDQHLSSLLSEAAAVFTDKDPNVRMSA
TRLLRFIAQSVPAERTSPFFPLLSAHLSCAMTHIETGIQEDALKVLDVLLDHYPALLAAR
PALLLTNFLELISHRSTGGGARKGQEGKGRSWALSVNPNRNVTGQQWRLTVLLRYLHFSQ
AVVEERRGEEGVACVSGDMFSVLNGQGGANAPLELNWEELTYGKGGFQVFEHSGAMPTPH
STFKLRPETEPGAGVSEGLGTGEAVRGFASTLVPLLLDVWVEASASDRSKTDSAHLLTPD
AMSLMYQVLSILQLLRKLAPQREHQDTLDAWFRSEYLGDFKQHFMKNFPYGNLDTPKQRR
KTDPKRSKQAPTIPGQTVEPLALNVLLCQVMVSMVTLSQGEGPAQEPDAEWLMPLRGFVQ
ETMSSGAKLSQRHLHTLLETVWRMVTTQRSRAVTEDLLQAVYVQYQQMNLNLQTRTLLLS
FYSRLYLQEHNHTHIARSRVLSRWLAALPLQLSQLGHRNPALSDRLLLSIQAAASRGNKA
LLNSLRTHACKLYDPQEGSVVLLPAESQQRLVQLLYFLPVMSQGLLANLSRCCTAGRVSA
GLAASLIRIIHLRSSLSGWSVGSQDATLRDVDYISFLFSTLTGFSSDELATLQEAGDESV
LPPSPLSPLSLYPTPLEQFTHHWDVVEEVCHCLETLGSRSQCFDVLQNGICKNLMGLAVV
PDSMAAGLLRAVARLLDLSFLPSEPLLRFLSRCCLSLLSLLLTLQQDTASENNHKREAVW
GACVAALSSVPRLLRLVLQSLQVRDLCEEELPQLAQILSLLLQNTALCNQMLANATLLQR
IIQDLTRYCRGESKEQWMTDLLYCYSVTMATHHGNLGLRDIY
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtgcaagaagaagaagaggcaggatgacttccagaaggtcaagctgaaggtg
gggaagactaagcctaaagctggcaacgccaccaacatcaacttccgcaccaagggaata
aacctaactgaacagctgaagaaagatgctaacgcacccaccacacacaggaagctcaac
atcaaggacctgttgtcccagctgcatcactacagtggtacagtgaagcagggagctctt
gtgggactgagggagctgctgacccttcacccctccgagttagatcaacacctctccagt
ctgctcagcgaggccgctgccgtcttcacagacaaggaccccaatgtacggatgtctgcc
acacgtctgctcaggttcatagcccagagtgtgccagcggagcggacgtctccattcttc
cctctcctctctgcccacctctcctgtgccatgacccacatcgagacaggcatccaggag
gatgccctgaaggtcctcgacgttctgctggaccactaccctgccctgctggccgctcgt
cccgccctgcttctcaccaacttcctggagctgatttcacacagaagcactgggggcggg
gccaggaaggggcaggaggggaaggggaggagctgggccctgtcagtcaaccctaacagg
aacgtgactggtcagcagtggagactcaccgtgctgctcaggtacttacacttttctcag
gcggtagttgaggagaggcgaggggaggagggggttgcgtgtgtctcaggtgacatgttc
agtgttttgaatggacaaggaggagctaacgcacctttggagctcaactgggaggagctt
acctacggaaaaggcggattccaggtgtttgaacattcaggagccatgcctactccgcac
tccaccttcaaactcaggccggagactgagcctggggctggggtgagtgaggggctgggc
acaggggaggctgtgcggggctttgcctccaccctggtgccccttctactagacgtctgg
gtagaggctagtgccagcgaccggagcaagactgacagtgctcatctcctcacccccgac
gccatgtcactgatgtaccaggtcctctccatactacagctgctacgcaagctggcgcca
cagagagaacaccaggatacactggatgcgtggtttcgcagtgagtacctgggggatttt
aagcagcacttcatgaagaacttcccctatggaaatctggacacccctaaacaaaggagg
aagacagaccccaagaggagtaaacaggcacctacaatcccagggcagacagtggaaccc
ttggctctgaacgtgctgctctgccaggtcatggtttccatggttaccctcagccagggg
gaggggccagcccaggaacccgacgctgagtggctgatgcctctgagggggtttgtccaa
gagaccatgtccagtggggccaagctgagccaaagacacctacacacactcctggagact
gtctggagaatggtcaccacacaacgcagcagggcggtgacggaggacctgttacaggcg
gtgtatgttcagtaccagcagatgaacctgaatctgcagaccagaacactgctactttcc
ttctacagcagactgtacctacaggaacacaaccacacacacatcgccaggagtagagtg
ttgtctcggtggctggcagctctgccgctccagttgtcccagctgggccaccgtaacccc
gccctctcagacaggctcctcctctccatccaggctgctgcctcccgggggaacaaggcc
ctgctgaactccctacgcacacacgcatgcaagctctacgacccacaggagggcagtgtg
gtattattaccggctgagtctcagcagcgattggtccagctactctacttcctgcctgtg
atgtcacagggtctgttggccaatctgagtcgctgctgcactgcgggacgcgtctctgct
ggcctggctgcctccctcatacgcatcatacacctcaggtcctctttgagtggctggtca
gtagggtctcaggacgcgaccctgcgtgatgttgactacatcagcttcctgttctccacc
ctcacagggttttcgtctgatgagttggccaccctgcaggaggctggggatgagagtgtg
ctccctccctcccccctctcccccctcagcctgtaccccacccctctggagcaattcaca
caccactgggacgttgttgaggaagtgtgccactgcttggagacgctggggtctcgttca
cagtgcttcgacgtgctgcagaatggcatctgcaagaacctgatgggtctggctgtggta
ccagacagtatggcagcagggttgttaagagctgtggccagactgttggacctgtccttc
ctccccagtgaacctctgctgaggttcctgtcccgctgttgcctcagcctactgtctctg
ctactgaccctacagcaggacaccgcctcagagaacaaccacaagagggaggcggtgtgg
ggagcgtgtgtggcggcgctgagcagcgttccccggctgttgcggttggttctgcagtcg
ttgcaagttagggacctgtgtgaggaggagctgcctcagctggcccagatactgtccctg
ctgctgcagaacacagcgctatgcaaccaaatgctggctaacgcaactctgctacaacgc
atcatacaggacctcacgaggtactgtcgaggtgagtcgaaggagcagtggatgactgac
ctgctgtactgctacagcgtaaccatggcgactcaccatggaaacctggggctccgagac
atctactga
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