Coregonus clupeaformis (lake whitefish): 121543270
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Entry
121543270 CDS
T08357
Name
(RefSeq) phosphoinositide 3-kinase regulatory subunit 4 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04136
Autophagy - other
cclu04140
Autophagy - animal
cclu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121543270
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121543270
04136 Autophagy - other
121543270
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121543270
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121543270
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121543270
Protein kinases [BR:
cclu01001
]
Serine/threonine kinases: Other
VPS15 family
121543270
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121543270
Autophagy
Autophagosome formation proteins
PI3K complex
121543270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WDR55
HEAT
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
PK_Tyr_Ser-Thr
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
NBCH_WD40
EIF3I
Adaptin_N
Beta-prop_CAF1B_HIR1
HEAT_EZ
Beta-prop_Vps41
Beta-prop_EIPR1
HEAT_2
Beta-prop_EML
CEP104-like_TOG
Cnd1
TCAD9
Tti2
APH
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
121543270
NCBI-ProteinID:
XP_045064386
LinkDB
All DBs
Position
28:186030..201704
Genome browser
AA seq
1350 aa
AA seq
DB search
MGNQLAGIAPAQILSVDSYFSDIHDHEYDKSLGSTRFFKVARAKHREGLVVVKVFAIQDP
SLPLTSYKQELEELKIRLHSCQNCLPFQKASLTEKAAILFRQYVRDNLYDRISTRPFLNN
VEKRWLAFQILTAVDQAHKSGVRHGDIKTENVMVTSWNWVLLTDFASFKPTYLPEDNPAD
FNYFFDTSRRRTCYIAPERFVDGSMFTTDSDQNTPLVDLTSNSQRSRGELKQVMDIFSAG
CVIAELFTEGVPLFDLSQLLAYRKGHFQTEHVLMKIEDRYIRELVAQMVQREPEKRLTAE
EYLKQQRGNAFPDIFYTFLQPYMAQFAKETFQSADERVLVIRKDLDNILHNLRGGGPGGS
SEKREKGDQESGVVSAKEEQGLVVLVSVITSCLQTLRSCDSKLAALELVLHLAGRLRVET
LLDRITPYLLHFCSDPAPRVRAQAVHTLAKVLALVKEVPRNDVNIYPEYILPGIAHLAQD
DATIVRLAYAENIAHLAETALRFLELVQENNLNMEHDLNGEDTEDTLHPNENYDSELQAL
HEMVQQKVVTLLSDSENIVKQSLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHL
RGAFFDSIVGVAAYVGWQSSSILKPLLQQGLSDAEEFVIYKALNALTCMCQLGLLQKPHI
YEFVSDIAPFLCHPNLWIRYGAVGFITVVAQHLNIADVYCKLMPHLNPFITQPIIQIDKE
IVLLSVLKEPVSRSIFDYSLRSKDIGSLFRHLLLRQKKRSGSLPECPIPEDPAIAQLLKK
LLSQGMTEAEEDKLLALKDFMLKSNKAKANMGDQSHLGEAVQSGVIDLATLGIMGRQVDL
VKPKQEAEDKRDFIATASARKHTKQDSNMNEEWKSMFGSQEPAATAPQPPTVPEGAGTQT
RKSTASPGVPVGQSAGAVSTYQRRLNTCKAELQHLVQQKREQCSAERMAKQMMESAEWES
RPPPPGWHPKGLLVAHLHEHKSAVNRIRVSDEHSIFATASNDGTVKVWDSQKMEGKTTTT
RSVLTYSRIGGHVKSLTFCQGSHYLAAASDNGSIQLLAIEANKPPKSPKVNPFQTRFLDQ
KDDGCVVDVHHFNSGAQSVLAYATVNGSLVGWDLRSNSNAWTLRHDLRLGLITSFTVDMH
QCWLCLGTSNGTMACWDMRFQLPISNHSHPARARIRRLLMHPLYQSSVIAAVQGNNEVSM
WDMETGDRKFTLWASSAPPLSEMQPSPHSVHGIYCSPADGNPLLLTAGSDMRIRFWDLAY
PERSYIVAGGANEPLHCPSVLYSRKIIEGTEVVQEIHSKQKSGATEDTPRRGPESLPVGH
HDIITDIATFQTTQGFIVTSSRDGIVKVWK
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atggggaatcagctggcagggatcgctcccgcccagatcctatctgtcgacagctacttc
tctgatatccatgatcacgagtatgacaagagcctgggcagcacgcgcttcttcaaggtg
gcacgcgccaagcacagggaaggcctggtggtggtgaaggtgtttgccatccaggaccca
tctctacctctcaccagctacaagcaggagctggaggagctaaagatcagactacattcc
tgccagaactgcctgcccttccagaaggcctccctcactgagaaagcagccatcctcttc
cgccagtacgtccgggacaacttgtatgatcgcatcagcacgcgacccttcctcaacaat
gtagagaagcgctggctagccttccagatcctcaccgccgtagaccaggcgcacaaatcg
ggcgtgcgccacggtgacattaagaccgagaatgtgatggtgaccagctggaactgggtg
ctgctcacagactttgccagcttcaagcccacctatctgcccgaggacaacccagctgac
tttaattacttctttgacacatctcgacggaggacatgttacatcgcccccgagaggttt
gtggatgggagtatgttcaccacagacagtgaccagaatacccctctggtggacctcacc
agcaacagccagaggagcaggggagagctcaaacaggtcatggatatcttctcagcaggt
tgtgtgatcgcagaactcttcacagagggagtaccactgttcgatctctcccaacttctg
gcgtatcgcaaaggacacttccagacagagcacgttctcatgaaaatagaagaccgttac
atcagagagctagtggcccagatggtgcagcgggagccggagaagcgtctaactgcggag
gagtacctgaagcagcagagaggtaatgccttcccagacatcttctacaccttcctgcag
ccctacatggcccagtttgccaaggagaccttccagtcggcagacgagcgtgtgctggtc
atccgcaaggacctggacaacatcctccataacctccgcgggggagggccaggcgggtcc
tcggagaagcgtgagaagggggaccaggagtcgggtgtggtgtcggccaaggaggagcag
ggcctggtggtgctggtgtctgtcatcacctcctgcctccagacgctgcgttcctgtgac
tccaagctggcggctctggagctggtgctgcatctggcgggccgccttagggtggagacg
ctgctggaccgcatcacgccatacctgctgcacttctgcagcgacccggcgccgcgggtt
agggcccaggctgtgcacaccctagccaaggtgctggcactggtgaaggaggttccccgt
aacgatgtcaacatctaccccgagtacatcctgccgggcattgcccacctggcgcaggac
gatgccaccatcgtcaggctggcatacgcagagaacatagcccacctggctgagacagct
ttgcggtttttagagcttgttcaggagaataacctgaatatggagcacgacttgaacgga
gaggacacagaggacaccctccatcccaacgagaactacgactctgagctgcaggcgctg
catgagatggtacagcagaaggtggttacgttactgagcgactcagagaacatcgtcaag
cagtctctgatggagaacggcatcacgcggctctgcgtgttcttcggccggcagaaggcc
aacgacgtgctcctgtcccacatgatcaccttcctgaatgacaagaatgactggcacctc
cggggagccttcttcgacagcatcgtgggtgtggcggcgtacgtgggctggcagagctcg
tccatcctgaagcccctcctgcagcagggtctgagtgacgcggaggagtttgtcatctac
aaggccctcaacgctctcacctgcatgtgccagctgggcctgctgcagaaaccacacatc
tacgagtttgtcagtgacattgccccattcctgtgccaccccaacctgtggatccgctac
ggggcggtgggcttcatcactgtggtggcccagcacctcaacatagcagacgtctactgc
aaactgatgcctcacctcaaccccttcatcacccagcccatcatacagattgataaagag
atagtgctgctgagtgtgctgaaggagccagtgagccgctccatcttcgactactccctg
cgctccaaagacatcggcagcctcttccgccacctgctgctgcggcagaagaagcgcagc
ggctcactcccagaatgccccattccggaggaccccgccatcgcccagctgcttaagaaa
ctgctctcgcaggggatgacggaggctgaagaggacaagctgctagcactgaaggacttc
atgctcaagtccaacaaggccaaggccaacatgggagaccagagccacctgggggaggcg
gtccagagtggggtcattgacctggccacgctgggcatcatgggacgtcaggtggacctg
gtcaaacccaaacaggaggccgaggacaagcgagacttcatcgccacagcatctgcacgg
aaacacaccaaacaggactcaaacatgaatgaagagtggaagagcatgtttggctctcag
gagccagcggctacagcaccacagcccccgacggtgcctgaaggggcggggactcagacc
aggaagagcacagcctcccctggtgtccctgtggggcagtctgcaggcgcagtctccacc
taccagcgtcgtctcaacacgtgcaaggcggagcttcaacatctggtgcagcagaagagg
gaacagtgcagcgcagagcgcatggccaagcagatgatggagagcgctgaatgggagagc
cgtccgcctccgccagggtggcaccctaagggtcttctagtggcccacctccatgagcac
aagtctgctgtcaaccgtatccgtgtgtcagacgagcactccatcttcgccacggcctcc
aacgacggcaccgtcaaggtctgggacagccagaagatggagggcaaaaccaccaccacc
aggtcagtgctgacgtactctcgcatcgggggccacgtgaagtcgttgaccttctgtcag
gggtcacattacctggctgctgcctcagacaacggttccatccagctcctggccattgag
gccaacaagcctcccaaatcacccaaggttaacccatttcagaccaggttcctggaccag
aaggatgacggctgcgtggtggacgtccaccattttaattctggagcccaatctgtgctg
gcctacgccacggtgaacggctccctggtgggctgggacttgcgctccaactccaacgcc
tggaccctccgccacgacctccgactgggtcttatcacctccttcactgtggacatgcac
cagtgctggctctgcctaggtacaagcaacggcactatggcatgctgggacatgcggttc
cagctccccatctcaaaccactcccaccctgcccgagcacgaatcagacggctgctcatg
cacccgctctaccaatcctccgtcatcgctgcagtccagggcaacaatgaggtatccatg
tgggacatggagactggggacaggaagttcacgctgtgggccagctctgctccccctctc
tcagagatgcagccgtccccccacagtgtccatgggatctactgcagccctgcagacggg
aaccccctcctcctcacagccggctctgacatgagaatcaggttctgggacttggcctac
ccagagaggtcctacatcgtggcaggtggagccaatgaaccgctgcactgtccctcagtc
ctctacagccgcaagatcatcgagggcaccgaggttgtacaggagatccacagcaaacag
aagagtggagccacagaggacaccccacgcaggggtcccgagtccctccccgtgggccac
catgacatcatcactgacatcgccaccttccagaccacacagggcttcatcgtcacttcg
tccagagacggcatcgtcaaagtctggaaataa
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integrated database retrieval system
