KEGG   Coregonus clupeaformis (lake whitefish): 121543318
Entry
121543318         CDS       T08357                                 
Symbol
pspc1
Name
(RefSeq) paraspeckle component 1
  KO
K24993  paraspeckle component 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    121543318 (pspc1)
Spliceosome [BR:cclu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    121543318 (pspc1)
SSDB
Motif
Pfam: RRM_1 NOPS RRM_7 PRCC
Other DBs
NCBI-GeneID: 121543318
NCBI-ProteinID: XP_041709045
LinkDB
Position
28:22748823..22763409
AA seq 509 aa
MDSPAMERRPNAAEGKIPPPKPSTATSPPAEGEGVAGESLEMTLDIKSFRRPGEKTFTQR
CRLFIGNLPTDLTEDDFKKLFSKYGEANEVFINRDRGFGFIRLETRTLAEIAKAELDGTV
LGNRPIRIRFATHGSALTVRNLSPVVSNELLEQAFSEFGPVERAIVVVDDRGRPTGKGIV
EFANKPSARKALDRCSDGALLLTTSPRPAIVEPTEQLDEEDGLPEKLLVKSVPYHKEREH
PPRFAQPGTFEFEYSSRWKALDEMEKQQRDQVERNIREAKEKLEQEMEAAKHEHQLMMMR
QDLMRRQEELRRLEELRNQELQKRKNIEMRHEERRRQEEEMMQRHREQDEMRRQPDGFKP
NYVDSREQEMRMGELGPRGAINMGDGFNPASVAGASVNQGPPQMMGIGMSGRAGAMGPEG
TPNMGAPNMMPDNGAMLRNDRFPQGAPNQMGSSPMGGRPGVESPQQQPAVGAGLMGAGPG
PAVGGPASFGRGIPVVGNYDGPNNKRRRY
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggactctccagccatggagcgaaggccgaatgctgcggaagggaaaatcccaccacca
aagccgtcgacggctaccagccctcccgcagagggggagggcgtagccggagagtcgctg
gagatgacgctggatataaagagtttcaggagacccggggagaaaaccttcacgcagcga
tgtcggttgttcatcggtaacctcccgacagacctcacggaggatgatttcaaaaagctg
ttttccaagtatggcgaggctaacgaggtgtttatcaaccgagaccgaggatttggcttc
attcgactggaaaccaggacgctggcggagatcgccaaggcagagctggacggcacagtg
ctggggaaccgacctatccggatccgcttcgccacgcacggctctgccctcacggtgcgg
aacctttcccctgtggtctccaacgagctccttgagcaggccttctccgagttcggccct
gtggagagggctatcgttgtggtggacgaccgcggaaggcctacagggaagggcatcgtg
gagtttgccaacaaaccttctgctcgtaaagccctggaccgctgttctgacggggcgctg
ctgctcaccacgtctccacggccggccatagtggaacccacagagcagctggatgaagag
gatggactcccagagaagttgctggtgaaatctgtaccctaccacaaggagagggagcac
cccccacggtttgcccagccggggacgtttgagtttgagtactcgtcccgctggaaggcc
ctggacgagatggagaagcagcagagagaccaggtggagcgcaacatcagagaggccaag
gagaagctggagcaagagatggaggcagccaagcacgagcaccagctcatgatgatgaga
caagacctgatgaggcgtcaagaggagctgagacgtctggaggagctacgcaaccaggag
ctgcagaaacgcaagaatatagagatgagacatgaggagaggcgtaggcaggaggaggag
atgatgcagcgccatcgagagcaggacgagatgaggcgccaaccagacggcttcaagcca
aactatgtggacagcagagaacaggaaatgagaatgggtgaactgggccctcgtggagcc
attaatatgggagatgggtttaaccctgcctctgttgccggggccagtgttaaccaggga
ccccctcaaatgatgggcataggcatgagcggaagggccggagccatgggccccgaggga
actccaaacatgggcgcaccaaacatgatgccagacaatggagccatgctgcgcaacgat
aggttcccccagggggctcctaatcagatgggttcttcccccatggggggccgtccaggg
gtggagtcccctcaacagcaaccggcagtgggggcagggcttatgggggcagggcctggg
cctgcagtgggggggccagcaagcttcgggaggggaatccccgttgtgggaaactatgac
gggcctaacaacaaacgtcgtagatactga

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