Coregonus clupeaformis (lake whitefish): 121543349
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Entry
121543349 CDS
T08357
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121543349 (mkrn1)
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121543349 (mkrn1)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121543349 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_3
zf-RING_2
zf-CCCH_9
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
121543349
NCBI-ProteinID:
XP_045071397
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MAEAAAATAAPAITGGWTKHVTCRYFMHGLCKEGTNCRYSHDLNSSTPAAAMICKFFQKG
NCVFGDRCRFEHSKEDMPGPKPTLPSSASACAPPSLSAPAPLPSGPGAGESADGPENPHG
SGAGDWVMAAEFVPGQPYYWGRDPVKSEGPGPGVGPLMALEKDPAVDDKELRKTLCPYAA
MGECRYGLNCAYLHGDVCDMCGLQVLHPSNDAQRSEHTKACMEAHEKDMEISFAIQRSKD
MQCGVCMEVVFEKANPSERRFGILSNCCHCYCLKCIRKWRSAKTFESKIIKSCPECRITS
NFVIPSEYWVEDKEDKQKLIQKYKDGMGTKACRYFDQGRGTCPFGSNCFYKHAFPDGRLE
EPQPQRRQSGSNGRNRNSRRTPLWELFEERENSSDSFDNEDEEMVTFELSEMLLMLLAAG
TDEDVTDSEDEWDLFHEELDDIYEIYL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggcagcagcaacagcggctccagcaataacaggaggctggaccaaacac
gttacctgcaggtatttcatgcatgggctttgcaaagaaggcaccaactgtcgatattcc
catgatcttaacagcagcacaccagcagcagctatgatttgcaagttctttcagaaagga
aactgtgtgttcggagaccggtgcaggtttgaacactctaaagaagacatgcctgggccc
aagccgacgctgccgtcctctgcctccgcctgcgcccctccctccctcagcgctccagcc
cctctgcccagtggaccaggggctggtgagtcagcagatggcccagagaacccccatgga
tcaggggcaggggactgggttatggcagcagagtttgtgccaggccagccctactactgg
ggacgggacccagtgaagtctgagggcccggggccgggggtgggtcctctgatggcgcta
gagaaagacccagcggtagacgataaggagttgaggaagactctgtgtccctacgccgcc
atgggggagtgccgctacggactcaactgtgcctatctccatggtgacgtgtgtgacatg
tgcggcctgcaggtgctccatccctccaacgacgcccagcgatcagaacacaccaaggct
tgcatggaggcccatgagaaggacatggagatctcgtttgccatccagcgcagtaaggac
atgcagtgcggtgtgtgcatggaggtggtgtttgagaaggccaaccccagcgagagacga
ttcggcatcctgtccaactgctgccactgctactgcctcaagtgcatccgcaagtggagg
agcgccaagacgttcgagagcaagatcatcaagtcctgtccagagtgtcggatcacgtcc
aacttcgtcatccccagtgagtactgggtggaggacaaggaagacaagcagaaactgata
caaaaatacaaggatggcatggggactaaagcctgtcggtacttcgaccagggtcgtggc
acctgtccgtttggctccaactgcttctacaaacacgccttccctgacggacggctggag
gagcctcagccgcagagaagacagtcgggttccaacggcaggaacaggaactcgaggagg
acgcccctgtgggagctgtttgaagagcgggagaacagcagcgactccttcgacaacgag
gacgaggagatggtgacctttgaactgagcgagatgctcctcatgctcctcgctgcaggg
accgacgaagacgtcaccgactcggaggacgaatgggacttgtttcacgaagagctggac
gatatctacgagatttacctatag
DBGET
integrated database retrieval system
