Coregonus clupeaformis (lake whitefish): 121543362
Help
Entry
121543362 CDS
T08357
Name
(RefSeq) oxysterol-binding protein-related protein 8 isoform X1
KO
K22285
oxysterol-binding protein-related protein 8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121543362
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121543362
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
121543362
Transporters [BR:
cclu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
121543362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
PH
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
121543362
NCBI-ProteinID:
XP_045064623
LinkDB
All DBs
Position
28:19347376..19505982
Genome browser
AA seq
955 aa
AA seq
DB search
MDSSCSESQSQGDSEKALLHAEIREHPTTSAALIPSDDSIILTPGRMSQRSQGKEREKRE
EKEREKEREKEKEREKEREKEKEREREKEKEREKDGSLHTPSRDHLASPSSLSPGLSYTH
GFDRGKEDSLPPKEDSSHSISKSKSESKLYNGSDKDVSASGNKLTKKESLKVQKKNYREE
KKRATKELLSTITDPSVIVMADWLKIRGTLKSWTKLWCVLKPGVLLIYKTHKNGQWVGTV
LLNACELIERPSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPGSHLIFRATSES
DGRCWMDALELALKCSGLLKRTMIREGKEELATTAGESSQINFYSLLRAHNMQGFQFNDS
DQFKDPDLYSDKSDREGEQDHEESDVEGLEKSEESDSDTSERQDDSYIDLDPNEALRETP
YLEQSHEELGEAGEASQTETVSEENKSLIWTLLKQVRPGMDLSKVVLPTFILEPRSFLDK
LSDYYYHADFLSEAAVEENAYNRMKKVVKWYISGFYKKPQGLKKPYNPIIGETYRCMWLH
SKTNSKTFYISEQVSHHPPVSAFYVSNRKDGFCLSGSILAKSKFYGNSLSAILDGEARLT
FLNRGEDYVMNMPYAHCKGILYGTMTLELAGQITIACEKTGYSAQLEFKLKPFLGNNDSV
NQISGKIKLGKEVLATLEGHWDSEVFINDKKTGVVDTFWNPTPELRQSRLTRCTVPPEDQ
GDYESERLWQHVTRAINNKDQTEATNEKFILEEAQRKSARERKAKCEDWAPGLFEQDPVT
GEWHYRYADTRPWDPLNDMIQFEKDGWIQTKVRHRTPMVRSASVISLSNQGPRRDGNCKC
QVTGPKRKQKHSDKPKKPESGCSSPEPDRQDSSGSERHKSKHSSRLRKKGPDLSELQSAI
DSIKKTQENIYKSIGVLRNRAAGQTAAEGGFLQQRDYAIIILLILLQVFINFLFK
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggactcttcatgttctgagtcccagtcccagggcgacagtgagaaagccctgctccat
gcagagatcagagagcaccccaccacatcagctgccttaattcccagtgatgactccatc
atattgaccccagggaggatgagccagcgaagccaggggaaggaacgagaaaagagggag
gagaaggagcgagagaaggagcgagaaaaggagaaggagagggagaaggagagggagaag
gagaaggagagggagagggagaaggagaaggagagggagaaggatgggagcctccacacg
cccagcagagatcacctcgccagcccctcttccctcagccctgggctcagctacacccat
ggtttcgaccgagggaaagaagattccctgcctccgaaagaggactcctctcactccata
tccaagagcaagtccgagtccaagctctacaatggctccgacaaggatgtctcggcatcc
gggaacaagctcactaagaaggagtcgctcaaggtacagaagaagaactaccgtgaggag
aagaagagagccaccaaggagctcctcagcaccatcacagacccctctgttattgtcatg
gctgactggctcaagatccggggtactctgaagagctggaccaagctgtggtgtgtgctg
aagccgggggttctgctcatctacaagacccataagaacggccagtgggtgggcacggtg
ctgctcaacgcctgcgagctcatcgagagaccctcaaagaaggacggcttctgtttcaaa
ctattccacccgctggagcagtccatctgggcagtcaagggtcctaaaggggaggcggtg
ggttccatcacacagccattacccggcagccacctcatcttccgcgccacctctgagtca
gacggccgttgttggatggatgctctggagctggctctgaagtgctccggcctcctgaag
cgcaccatgatccgcgagggcaaggaggagctggccaccacggccggggagagctcccaa
attaacttctacagcctgctgcgagcccacaacatgcagggcttccagttcaatgacagt
gaccagttcaaggaccccgacctgtactcagacaagtcggaccgggagggggagcaggac
catgaggagtcagacgtggaggggctggagaagagcgaggaaagcgacagtgacacgtcg
gaacgccaggacgactcctacattgaccttgaccccaacgaggccctgcgggagaccccg
tacctggaacagtcccacgaggagctgggagaggctggtgaggcgtcccagacagagacg
gtgtcggaggagaataagtctctgatctggacgctgctgaagcaggtcaggcctggaatg
gacctgtctaaagtggtcctccccaccttcatcctggagccacgctccttcctggacaag
ctgtccgactactactaccatgctgacttcctctctgaggcagctgtggaggagaatgcc
tacaacaggatgaagaaagtggtgaagtggtatatctctggattctacaaaaagccacag
ggactgaagaagccgtataaccccatcattggtgagacctaccgctgcatgtggctccat
agcaagaccaacagcaagaccttctacatttctgaacaggtgtcccatcatcctccagtg
tcggcgttctacgtcagtaacaggaaggacggcttctgtctcagcggaagcatcctggcc
aagtccaagttctacggaaactccctgtcggccatattggacggagaggctcggctcacc
ttcctcaacagaggagaagactacgtcatgaacatgccctacgcccactgcaaaggcatt
ctgtatggcaccatgactctggagctggctggccagatcaccatcgcctgtgagaagacg
ggctacagtgcccagctcgagttcaaactcaagccgttcttgggtaacaatgacagcgtc
aaccagatctctggaaagatcaagctggggaaggaggtgctggctacactggagggacac
tgggacagtgaagtcttcatcaacgataagaagaccggggtggtggatacgttttggaac
cccaccccagagctacgtcagagcaggctaacacgctgcaccgtgcctcctgaggaccag
ggagactatgagtctgagaggttatggcagcatgtaacgagggccatcaacaacaaggac
cagacagaggccaccaatgagaagtttatcctggaagaggctcagaggaagtcggcccgc
gagcgcaaggccaagtgtgaggactgggcgcccgggctctttgaacaggaccccgtcacc
ggagagtggcattacagatatgccgacacccggccgtgggatccgctgaatgatatgatt
cagtttgagaaagacggctggatccagactaaagtgcggcatcgcacccctatggtacgt
tctgccagtgtaattagtctcagtaaccagggcccaaggagggatggcaattgcaagtgc
caggtgacagggcccaaaagaaagcagaagcacagtgacaagcccaagaaacctgagagt
ggctgctcctccccagaacctgaccgccaggactcctccgggagcgagcgacacaaaagc
aagcacagtagccggttaaggaaaaagggcccagaccttagtgaacttcaaagtgccatt
gattctataaagaagacacaggagaacatttacaagagcattggcgtgctgcgcaaccga
gcggcgggccagacggcggcagagggcggcttcctgcagcagcgcgactacgccatcatc
atcctcctcatccttcttcaggtcttcatcaacttcctgttcaagtag
DBGET
integrated database retrieval system
