Coregonus clupeaformis (lake whitefish): 121543372
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Entry
121543372 CDS
T08357
Name
(RefSeq) synaptotagmin-like protein 4 isoform X1
KO
K17598
synaptotagmin-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121543372
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121543372
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121543372
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
121543372
Small GTPases and associated proteins
Rab associated proteins
121543372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
Motif
Other DBs
NCBI-GeneID:
121543372
NCBI-ProteinID:
XP_041709125
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Position
3:complement(27505131..27534315)
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AA seq
716 aa
AA seq
DB search
MPQAADMINVAFLTDSERELILEVLRRDEELRQAEEHRVRKLKTELLDIKRKGAKRSSGR
YSEHSCGRCQEPLGPLSAGSSQCRACKYQVCHNCCSVRPNGSWVCSVCAKEADLKKCTGD
WFCDQRVNRFSTITGHDIVRNSLKKRPPLRENMGELLLKSTELNPSQPPTPVPRPRLRDL
AASNKDLLDEASEESVGVKTKEQQEQQQRRDPESAEKASLNSVMTETESSLGTPLLPRKE
ESTGQSSPTGSIMNVLVKADHIRSHSSTSDADTSSVVNCRSVSPCTGSVALEDGGVFKKS
VRRVQKPSEFTSVLDLREEGAEASEGFMGDRSKSVPGLNVLDDEEDDEDIDNLVSIHRKV
ASSTSNLRGSKSTLGSLMSIYSEAGDYDSVEVSGDIVFSISYNDTTQSLAVLIKECHSLA
HGDARRQHSNPYVKCYLLPDKSRTGKKKTSIKRNTVDPTYNETLKFSISRSQVLIRSLQL
SVWHHARLGRNAFLGEVEVPLDCRDLDAGHEECVALMGKASPLQSSAFSQYKGELLISLK
YVSTKKPPTEKTKGKTLSLGKKSKTEQGGELHVLIKEAKNLTAMKAGDTSDSFVKGYLLT
SKAKSTKRKTPVVKKTLNPHYDHTFVFKDLTLDQLSEMWLELTVWDREAMSSNDFLGGVR
LSTGAATLKVGKEEVEADSTGEEVTLWQKMMQYPDSCAEGTLPLRSSMGKNKSKSK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggctgcagacatgatcaatgtggccttcctgaccgactcggagcgggagctg
atcctggaggtgctgcggagggacgaggagctgaggcaggctgaggagcaccgtgtccgg
aagctgaagacggagctgctggacataaagaggaaaggggccaagcgtagcagtgggagg
tacagtgagcacagctgcggccgctgccaggaaccactgggtccactgtctgccggctcc
agccagtgtagggcatgtaaataccaagtgtgccacaactgctgctcagtgcgccccaat
ggatcctgggtgtgcagtgtgtgtgctaaagaggctgatctgaagaagtgcactggagac
tggttctgtgaccagcgagtcaaccgcttctccactatcactggacacgacatagtgaga
aattccctcaaaaagaggcccccattgagggagaacatgggagagctcctgttgaagagt
acagagttgaaccccagccagccccccacccctgttccccgacccagactgagggaccta
gcagcctccaacaaggatctgctagacgaagcctcagaagaatcagtgggagttaagacc
aaggagcagcaggagcaacagcagcgcagggaccctgagtctgcagagaaagccagcctg
aacagtgtcatgacagagactgagtcctctcttgggactcctctcttaccaaggaaggag
gagagcacaggtcagtccagtccaacagggtccattatgaatgttctagtcaaagcagac
cacatcaggagccacagctccacctcagacgcagacacgtcttccgtagtgaattgtcgt
agtgttagtccctgcacagggtctgtcgcattggaagatggcggcgtgttcaagaagagc
gtcagacgagttcagaaaccctccgaattcacgtctgtgctggacctgcgtgaggagggg
gctgaagcatcagagggctttatgggtgacaggagcaagtctgtgcctgggctcaatgtg
ctggatgacgaggaggatgatgaagatattgataacttggtgagcatccatagaaaggtg
gcctcaagtacctcaaatcttcgcggctccaagagcacactgggcagtctgatgagtatt
tacagtgaggcaggagattatgacagcgtggaggtgagcggggacatagtgttctctatc
agctacaatgacaccacccagagcctggccgtcctcatcaaggagtgtcactcgctggcc
catggggacgccagacgccagcactcaaacccgtatgtcaaatgctaccttctccctgac
aagtctcgcacgggaaagaagaaaaccagcatcaaacgtaacacagtggaccccacttac
aatgagaccctaaagttttccatcagtcgctcccaggtgctcattcgttccctccagctc
tccgtctggcaccatgcccgcttgggccgtaatgccttccttggagaggtggaggtgcct
ctggactgcagggacctcgacgccggccacgaggagtgtgtggcgctcatgggaaaagcg
tcaccactacagtcctctgccttctctcagtacaaaggagaactgttgatttccctgaag
tacgtctcgaccaagaaaccacccactgaaaagactaaaggcaagactctctctctaggc
aagaagtcaaagacggagcagggaggggagttgcacgtcttgatcaaagaggccaagaac
ctgacggcaatgaaagcaggggacacgtcggattcctttgtgaaagggtacttgttgaca
tcgaaggccaagtccactaagaggaagactccggtggtgaagaaaactctgaaccctcac
tacgaccacacatttgtgttcaaagacctgaccctagaccagctaagtgagatgtggcta
gagctgaccgtgtgggacagggaggccatgtccagtaatgacttcctgggtggggttcga
ctcagcacaggcgcagccacactgaaggttgggaaggaggaagtggaggcggattcaaca
ggggaggaggtgactctgtggcagaagatgatgcaataccctgactcgtgcgcagagggc
actcttccattacgctcctctatgggcaagaacaagagcaagagcaagtga
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