Coregonus clupeaformis (lake whitefish): 121543383
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Entry
121543383 CDS
T08357
Name
(RefSeq) plexin-A4
KO
K06820
plexin A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121543383
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
TIG_2
PSI
Sema
TIG_plexin
PSI_PlexinA-B
RasGAP
PSI_Plexin-B
PSI_integrin
DUF948
LapA_dom
Motif
Other DBs
NCBI-GeneID:
121543383
NCBI-ProteinID:
XP_041709141
LinkDB
All DBs
Position
Unknown
AA seq
1924 aa
AA seq
DB search
MESHHTRTRTSCLTLCCFLLALALPLSLASRPLPHAPDGAAIITASIDAAEEEDYSTFSA
ENPEWKFNHVAVDERNGNVYLGAVNRIYKLSPDLNVQVYHETGPDEDNRKCYPPRIVQPC
SEPLSLTNNVNKMLLMDYRENRLLACGSLYQGICKLLRLDDLFKLGEPFHKKEHYLSGVN
ESGSVFGVIVSYGDSSPDKLFVATAVDGKPEYFPTISSRKLARNSEEDGMFAYVFHDEFV
ASMIKIPSDTFTIVPDFDIYYVYGFGSGNFVYFLTLQPEMGNGPTAGSSSAGREQVYTSK
IVRLCKDDTAFNSYVEVPLGCVKGGVEYRLLQAAYLSKAGAILGRSLGVGPDDDVLFTVF
SKGQKRRPREASQESALCVFALREINERIKERLQSCYKGEGTLDLAWLKVKDIRCSSALL
TIDDNFCGLDMNAPLGVSEMVQGIPLFSDSTDKMTSVIAYVYKNHSLAFVGTKSGRIKKI
RVDGPSHGALQYEVIQAVERGPIQRDMAFSPDHHFLYAMSETQMTRVPVEACGQYSTCSE
CLGSGDPHCGWCVLHNMCTRKEKCERSAEPRRFAWDIKQCVRLSVHPSNISVSQFSVTLI
LEAHNVPELSAGVNCTFEDLAEMDGLVEGNRIKCSSPAEKEVPRIIVDKGDHQIVQLYLK
SKETGLVFANTSFVFYNCSVHKSCLSCVRSPYQCHWCKYRHDCTHDPRTCSFQEGRVKKP
EECPQLLPTERILVPVNVVKPITLRAKNLPQPQSGQRGYECLLTIQGVEQRVPALRFNSS
SVQCQNTSYSYDGMEMSSLPVDLTVVWNGDFSIDNPADNKVHIYKCDAQRGSCGLCLKAD
PLFGCVWCKGENRCTLKQHCPQPESQWLENNGLNSKCTHPRITQITPLRGPREGGTLVTI
RGENLGLDFSEIQGNVRVAEVDCTPVREGYIPAEQIVCEMAVATQSQFANYVEVCVGGVG
VRECPKEFRAISSKYYYFVVPRLIRLKPSRGPVSGGTIVNITGSNLDAGSNVSIMFKDQK
CTYHRRGGQWITCRSHASLQGYGNVSVSVTVDKARIQKDLKFEYVEDPTIIKLEPEWSIF
SGHTPVTVTGTNLDIIQSPLIRAKYNGRETVNICQVFSPMSMLCQAPELPISLGRQREVP
ARPDEFGFILDDVQAVLALNNTAFIYYPNPEFEPLHVSGVLELKPGSPIILKGRNFLPPT
NTNGNNGKLNYTVLIGDKPCLLTVSDNQLLCESPNLTGRHKVLARVGGIEFSPGVVHITS
DSPLSSTAIISIAGAGALLIFFIVIVLIAYKRKSRESDLTLKRLQMQMDNLESRVALECK
EAFAELQTDIHELTSDLGGVGIPFLDYRAYTMRVLFPGIEEHPVLRDLEVPGYRQEQVEK
GLKLFGQLINNKVFLLSFIRTLESQRGFSMRDRGNVASLIMTMLQSKLEYATDVLKHLLS
DLIDRNLESKNHPKLLLRRTESVAEKMLTNWFTFLLHKFLKECAGEPLFSLFCAIKQQME
KGPIDSITGEARYSLSEDKLIRQQIDYKTLVVNCIHPDNEKSPEIQVKVLNCDTISQVKE
KILDAIYKNVPHSHRQKASDMDLEWRQGRGQRTILMDEDLSTKIESDWKRLNMLTHYQVP
DNSVMALVPKQVTAYNSVNNSTVSRTSASKYENMIKYTGSPDSLRSRTPMITPDLESGVK
VWHLVKNHEHGDQKEGDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALP
LAIKYMFDFLDEQADKHSIHDPHVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKSSITDAC
LSVVAQTFMDSCSTSEHRLGKDSPSNKLLYAKDIPSYKSWVERYYSDISKMPAISDQDMN
AYLAEQSRMHINEFNSMSSLSEIYSYVGKYTEEIVCALEQDDAARKQRLSFKLEQVVAFM
SLES
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccaccacaccaggacacggacttcctgtctgaccctttgctgcttcctgttg
gccctggccctccctctctccttggcatccaggcccctcccccatgcccccgacggcgcc
gccatcatcaccgcctccatcgacgcagccgaggaggaggactatagcacgttcagcgcc
gagaaccctgagtggaagttcaaccacgtggccgtggacgaacgcaacggcaacgtgtac
ctgggagcggtcaaccgcatctacaaactctcccccgacctaaacgtacaggtgtaccac
gagactggccccgacgaggacaaccgcaagtgctacccaccacgcatcgtgcagccctgc
agtgagcctctatctctcaccaacaacgtcaacaagatgctgctgatggactaccgggag
aaccggctactagcctgtggtagtctctatcagggcatctgtaaactcctccgcctggat
gacctgttcaagctgggagagcccttccacaagaaggagcactacctgtccggggtcaac
gagagcggttcggtgttcggcgtcatcgtgtcgtacggggactcctcgcccgacaagctg
tttgtggccacggcagtggatggcaagcccgagtacttccccaccatctccagccgcaag
ctggcgcgcaactcggaggaggacggcatgttcgcctacgtcttccacgacgagtttgtg
gcatctatgatcaagatcccgtcagacacgttcaccatcgtgcctgacttcgacatctac
tacgtctacggattcggctcgggtaactttgtctacttccttacactgcagccggagatg
gggaacgggccgaccgccggctcctcctctgcggggcgggaacaggtgtacacttctaaa
atagtccggctgtgtaaagacgacacagcgtttaactcgtatgtggaggtgcccctgggc
tgtgtgaagggcggcgtggagtaccggctcctacaggcagcctacctctccaaggcgggt
gccatattggggcgctcgcttggtgtggggcccgacgatgacgtcctcttcaccgtcttc
tccaagggccagaagcggcggccgcgcgaggcctcgcaggagtcagcgctgtgcgtgttc
gccctgcgggagatcaacgagcgcatcaaggaacggctgcagtcgtgctacaagggtgag
ggcaccctggacctggcctggctcaaggtcaaggacatccgctgcagcagcgctctccta
accatcgacgacaacttctgtggcctggatatgaatgctccgctgggggtgtcagagatg
gtgcagggcatccctctgttctccgactccaccgacaagatgacctcggtcatcgcctac
gtctacaagaaccactctctggccttcgtgggcaccaagagcgggcgcatcaagaagatc
agggtagacgggccttcccacggtgcattgcagtacgaggtgatccaggcagtggagcga
gggccaatccaacgggacatggccttctcccccgaccaccacttcctatacgccatgtca
gagacacagatgacgagggtgccagtggaagcctgtggccagtactccacctgcagcgag
tgtctgggctcaggagaccctcactgtggctggtgtgtcctgcacaacatgtgcaccagg
aaggagaaatgcgagcgatcggccgagccccggcgattcgcctgggacatcaagcaatgt
gtccgcctcagtgtccaccccagcaacatctcagtgtcccagttcagtgtcacgctgatc
ctggaggcccataacgtcccagagttgtctgcaggggtcaactgtacctttgaggacctg
gctgaaatggacggtctggtggaggggaatcgcatcaagtgcagctcgcctgccgagaag
gaggtgccccgcatcattgtagacaaaggtgatcaccagatagttcagctctacctcaag
tccaaggagacgggcctggtcttcgccaacaccagctttgtcttctacaactgcagcgtc
cacaagtcgtgtttgtcatgtgtgagaagcccctaccagtgccactggtgtaaatacaga
cacgactgcacccacgacccacgcacctgctccttccaggagggacgcgtcaagaagcca
gaggagtgtccccagctgctgcccaccgagcgcatcctggtgccggtcaacgtggtgaag
cccatcaccctgcgggccaagaaccttccccagccacagtcaggacagcggggctatgag
tgtctgctcaccatccagggcgtggagcagcgggtgcccgcgctccgcttcaacagcagc
agtgttcagtgccagaacacctcgtactcatatgatgggatggagatgagcagcctccct
gtggacctgacggtcgtctggaatggagacttcagcatcgacaaccccgccgacaataaa
gtccacatatacaagtgtgacgcccagaggggcagctgtgggctgtgtctgaaggcagac
cccctgtttggctgtgtgtggtgcaagggggagaaccgctgcaccctcaagcagcactgt
ccccagcctgagagccagtggctggagaacaatggactcaacagcaagtgtacacaccca
cgcatcacccagatcactccactgcgggggcctcgggaagggggcaccctggtaaccatc
cggggggagaacctgggcctggacttcagtgagatccaggggaacgtcagggtggccgag
gtggactgtacccccgtccgcgagggatacatccccgcagaacagatagtgtgtgagatg
gcggtggcaacgcagagccagttcgccaactacgtggaggtgtgtgtggggggtgtgggg
gtcagagagtgtccaaaggagttcagggccatatcctccaagtactactacttcgtggtc
cccagactgatccgcctgaagcccagccgagggcccgtctccgggggaaccatcgtcaac
atcaccggtagcaacctggacgccgggagcaacgtgtccatcatgttcaaagaccagaag
tgcacctatcacaggaggggcggccagtggatcacgtgtcgctcccacgcctcgctgcag
ggctatggaaacgtcagtgtgtcagtgacggtggacaaggcccggatccagaaagacttg
aagtttgagtacgtggaggaccccactatcatcaagctggaacccgagtggagcatcttc
agtgggcacacacctgtgaccgtgaccggcaccaacctggacatcatacagagccccctt
atcagagccaagtacaacggtcgagagacggtcaacatatgccaggtgttcagccccatg
tccatgctgtgccaggccccagagctgcccatcagcctgggcaggcagagggaggtgcca
gcacggcctgatgagtttggcttcatcctggacgacgtgcaggccgtgctggccctcaac
aacacggcgttcatctactaccccaaccccgagttcgaacccctccatgtgtccggggtg
ctggagctcaagcctggctcacccatcatactgaaggggcggaacttcctccctcccacc
aataccaatggcaataacggcaagctgaactacacggttctgattggtgataaaccttgt
ctgttgaccgtgtcagacaaccagctgctgtgtgagtcgcccaacctgacggggcgacac
aaagtcctggcccgtgtgggcggcatcgagttctccccgggcgtggtccacatcacgtca
gacagtccgctgagtagcacagccatcatcagcatcgccggcgccggcgccctgctcatc
ttcttcattgtgatagtgctcattgcctacaaacgcaagtcacgcgagagcgacctcacc
ctgaagaggctgcagatgcagatggacaacctggagtctcgtgtggccctggagtgtaaa
gaggcctttgccgagctgcagacagacatccatgagttgaccagtgacctgggcggagtg
ggcatccctttcctggactacagggcctacaccatgagggtcctcttccctggcatagag
gagcaccctgttcttagggacctggaggtgccgggctacagacaggagcaggtggagaag
ggcctgaagctgttcggccagctcatcaacaacaaggtcttcctgctctcattcatccgc
acgctcgagtcgcagcgcggcttctccatgcgcgaccgcggcaacgtggcctcgctcatc
atgacaatgctgcagagcaaactggagtacgccaccgacgtcctcaagcacctgctctct
gacctcatcgaccgcaacctggagagcaagaaccaccccaagctgctgctccgaaggacg
gagtctgtggcagagaaaatgctgactaattggttcaccttcctgctccacaagttctta
aaggagtgtgcgggtgagcccctcttctccctcttctgtgccatcaagcagcagatggag
aaaggtcccatcgactcaatcactggcgaggcgcgctactcgctcagtgaggataagctc
atcagacagcaaatcgactacaagacgctggtggtgaactgcatccacccagacaatgag
aagagccctgagatccaggtgaaggtgttgaactgtgacaccatcagccaggtgaaggaa
aagatcctggacgccatctacaagaacgttccccactcccacagacagaaggcctctgac
atggacctagagtggcgccagggcagaggtcagcgtacgatcctgatggacgaagacctc
tccaccaagatcgagagtgactggaagagactcaacatgcttactcactaccaggtgcct
gataactccgtgatggccctggtccccaagcaggttacggcctacaactcggtcaacaac
tccactgtgtccagaacctcggccagtaaatacgagaacatgatcaagtacacggggagc
cccgacagcctgcgctcgcgcacgcccatgatcacgcccgacctggagagtggggtaaag
gtgtggcacctggtcaagaaccacgagcacggggaccagaaggagggagaccgtggctcc
aagatggtctctgagatatacctgaccaggctgctggccaccaagggcactttacagaag
tttgtggatgacctgtttgagaccatcttcagcacggcccaccgaggcagcgccctgccc
ctggccatcaagtacatgtttgacttcctggacgagcaagctgacaagcacagcatccat
gacccgcatgtcagacacacatggaaaagcaactgcctacctctgaggttctgggtgaac
gtgatcaagaacccccagtttgtgttcgacatccacaagagcagcatcacggacgcctgt
ctgtctgtggtggcccagaccttcatggactcctgctctacctccgaacaccgcctgggc
aaggactcaccctccaacaagctgctctacgccaaggacatccccagttacaagagctgg
gtggagaggtactactcagacatcagtaagatgccggccatcagtgaccaggacatgaat
gcgtacctggcagagcagtcccggatgcacattaacgagttcaacagcatgagctccctc
agtgagatctactcctacgtgggcaaatacacagaggagattgtgtgtgcgctggagcag
gacgacgccgccaggaaacagagactttccttcaagctggagcaggtggtggccttcatg
agcctggagagctga
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integrated database retrieval system