KEGG   Coregonus clupeaformis (lake whitefish): 121543389
Entry
121543389         CDS       T08357                                 
Name
(RefSeq) chondroadherin-like
  KO
K06248  chondroadherin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510  Focal adhesion
cclu04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121543389
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121543389
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cclu00535]
    121543389
Proteoglycans [BR:cclu00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    121543389
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_5 LRRNT LRR_9 LRR_14 LRR_LRWD1 LRR_NXF1-5 LRRCT
Other DBs
NCBI-GeneID: 121543389
NCBI-ProteinID: XP_041709188
LinkDB
Position
1:complement(21835695..21843773)
AA seq 363 aa
MRRVSFLSVWTYLLVLGPVVWGAPSQCPAQCHCHGDLQHVICDNVGLKNIPQVSEATRLL
NLQRNNLGSLPTGSFASSKGLISLHMQHCQLREIGGQAFKGLKKLIYLYLSNNEITSIKP
GAFEDLTELTYLYLDGNRISDLPKGIFSPMINLFILQLNDNKLRDIKPGTFAGAKDLRWL
HMSGNEMSSLQPGSLDDVENLAILHLDRNRLSTYPGLAMSKLRVVEELSLAKNPLRSIPD
NAFQSFGRYMEKLYLDGMGLEKFSDGAFNGMRAIKSLHLENNKLKSLPKSLEFTTITNLT
LSNNPWSCTCMLAPLRKWMDSSRQRPDALCASPSSQRGKQIRDSSAFSDCTVKTKRAKKG
TRH
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgcggcgtgtgagcttcctctcagtgtggacctacctgctggtcctcggcccggtggta
tggggcgcccccagccagtgcccggcccagtgtcactgccacggggacctgcagcatgta
atctgtgacaacgtggggctaaagaatatcccgcaggtgtccgaggccacccgtctgctc
aacctgcagaggaacaacctgggcagcctgcccaccggctccttcgccagcagcaagggt
ctcatctcgttgcacatgcagcactgccagctccgcgagatcggcggccaggccttcaag
ggcctcaagaagctcatctacctctacctgtccaacaacgagatcaccagcatcaagccg
ggcgccttcgaggacctcaccgagctcacctacctctacctggacggcaaccgcatcagc
gacctacccaagggcatcttctcgcccatgatcaacctgttcatcctgcagctcaacgat
aacaagctgcgcgacatcaagccaggcaccttcgccggagccaaggacctgcgctggctg
cacatgagtggcaatgagatgagctcgctgcagccaggctctctggacgacgtggagaac
ctggccatcctgcacctggacaggaacaggctgtccacctaccccggcctggccatgagc
aagctgagagtggtggaggaactgagcctggccaagaaccccctgagaagcatccctgac
aacgccttccagagctttggacgctacatggagaagctgtacctggacggcatggggctg
gagaagttttctgacggtgcgttcaacggcatgagggccatcaagtctctgcacctggaa
aacaacaagctcaagtccctccccaagagcctggagttcaccaccatcaccaacctcacg
ctctccaacaacccctggagctgcacctgcatgctagcccctctgcgcaagtggatggac
tctagccgccagcgccctgatgcgctctgtgcctctccatcctcacagagaggaaagcag
atcagggatagctccgccttcagcgactgcacagttaagacaaagagagccaagaagggc
acacgccattaa

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